Colossoma macropomum (tambaqui): 118805563
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Entry
118805563 CDS
T09004
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118805563 (vps50)
Membrane trafficking [BR:
cmao04131
]
Protein recycling
Others
EARP complex
118805563 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
118805563
NCBI-ProteinID:
XP_036422330
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQESMADMSPVENFRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSSDSFDMVQYELEKLPPDLNLQELEEYRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLSFAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYSLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYYRTMQWHEEHDKEEAADPDAD
GTSNESPGDSTVGRSYVKKKLEHGLSRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
IAQLHEFKFMGQCRSPSVSPSRQPASSEPSELSLFEQYTQGGNPFEMQIDNKEEETEDVL
ASNGYESDELEKSVYQDYDSDSDVAEELKQDFVDEQTGDIPAKSVSRETLRSRKRSDYNL
NKANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDM
HAPCPAMPIPGGQLGGSRQVPPGCGYESSGLGLISSRLRTTLNRIQESLIDMEAGGESVG
PHGPPEERKEKVPSPHLSQLVVLTASGTLYGLAERVVATESLVFLAEQFELLQPHLDTMM
PPAKKPFLQQFYSQTVSTASELRKPTYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNV
YVDVLLKEFEQFNKRLGDVSRQVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGR
ALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLAN
LVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctctaatgtcccgacagggcttgaaaagccctcaggagagtatg
gcagatatgagccctgtggagaacttcagaatccccagcaaggaggagctgagggagttg
agagagcagcccattgatcctcaggcggagcaggagattattgacagtatagaggaggtt
tacttctccagcgactcctttgacatggtgcagtatgagcttgagaaacttcccccagat
ctgaacctgcaggaattggaagagtacagagataagctgaaaagacagcaagcagctgtg
tcgaaaaaagtggcagacctcattctcgagaaacagccgtcctacgttaaggagctggag
agagtaacgtccttgcagaccaacctgcagctggccgctgtcatctgcaccaacgctcgg
aggcagctgagctttgctaaagagggcttcactgaagccagtctagggcttctggccaac
cagagacggaggcagctgttgacaggattgctgaaatctttgaggaccataaagactctg
caaagaacagatgttaggctgagtgagatgctggaggaggaggactatccaggtgcaatc
cagttgtgtttggaatgccagaaggctgccagcactttcaaacactacagctgcataagt
gaattgaactcgaagctgcaagacaccctggaacaaattgaggagcagctggatgtggct
ttgtccaaaacctgcaagcactttgacgtctcgcactacaccaaagttcagctggcttac
tcccttctgggcaagacgcagactgctatggatcagcttcacatgcacttcacccaggcc
attcacaacaccgtgttccaggtagtactgggctatgtggagctgtgtgctggtaatgct
gacaccaagttccagaagatgcagtataaagatctctgcacacacatcactccagacagc
tacatcccctgcctgacggacctctgcaaggcattgtgggaggtaatgcttagctactac
cggaccatgcaatggcacgaggagcatgacaaagaggaggcagctgaccctgacgcagat
ggcactagtaatgagagcccaggcgattctacagtgggccgcagctacgtcaagaagaag
cttgagcatggcctgagtcggatttggcaggatgtccagctgaaagtgaaagcctattta
ctcgggacggacatgtccaacttcaagtacgacgacttcattgtggtgctggatgttatc
agcaggttaatgcaggtgggtgaggagttctgtggcagtaagtctgaggtgctgcaggag
tccattaagaggcagagcgtgaactactttaagaactatcacagaactcgcctggaggag
ttgcggatgtttctggaaaatgaaacgtgggagttgtgccctgtgaaatccaacttcagt
attgctcagctccatgagtttaagttcatggggcagtgtcggtctccgtcagtttctccc
agcaggcagccggcctccagcgagccttcggagctctcgttatttgagcagtacactcag
ggaggaaacccctttgagatgcagatagacaacaaggaagaagagaccgaggatgtgttg
gcctccaatgggtatgagtcagacgagctggaaaagagtgtgtatcaggactatgacagt
gacagtgatgtggcggaggagctgaagcaggactttgtggatgagcagactggagacatt
ccggcaaaaagtgtatccagagagacgctccgcagcagaaagaggtctgactacaacttg
aacaaagccaatgcccccattctgaccaacaccaccctcaacgtgatccgcctggtcggc
aaatatatgcagatgatgaacattttaaaacccattgcctttgacgtcatccactgtgta
tcgcagcttttcgactactacctgtacgcagtctacaccttcttcggccggaatgacatg
catgctccttgtccagccatgcctatcccaggcggccagctaggcggctccagacaggtg
ccccctggctgcgggtatgaatcatcagggctgggtctgatcagcagcagactgagaact
acactcaaccgcatccaggagagccttatagacatggaggcaggaggggagagtgtaggc
ccccatggacccccagaggagaggaaggaaaaggtgcccagccctcatctcagccagttg
gtggtgctgactgccagcgggacgctgtatggcctggctgagagagtagtcgcaaccgag
tcactagtgttcttggccgagcagttcgagctcctacagcctcatctggacaccatgatg
cctccagccaagaagcccttcctccagcagttctactcacagacggtgtccacagccagc
gagctccgcaagcccacttactggatagtggcagccaaagccattgattatgagcagatg
ctgctgctgatggcgggagtgaaatgggacattaaagagataatgtcacagcacaatgtc
tatgtggatgtccttttaaaggagtttgagcagttcaataaaaggctcggagatgtctcc
agacaagtacggatccccttgccggtgtccaatgtcctctgggagcactgcatccggctg
gccaacagaacactagtggagggctatgctaatgtgaagaagtgcagtaacgagggccga
gccctgatgcaactggacttccagcagttcctcatgaagctggagaaactgactgatctc
agacccatcccagataaggagtttgtagagacctacattaaagcctactacctgactgaa
aatgacatggagcagttcatcaagaatcacagggaatactccatgaagcagctggccaac
ctggtcaacgtctgcctcggctctcacatcaacaagaaagccagacagaaacttctcgca
gctattgatgacatcgaccgaccaaaaagataa
DBGET
integrated database retrieval system
