Colossoma macropomum (tambaqui): 118805614
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Entry
118805614 CDS
T09004
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04514
Cell adhesion molecules
cmao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118805614 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118805614 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmao00535
]
118805614 (sdc3)
Proteoglycans [BR:
cmao00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
118805614 (sdc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
PRP38_assoc
DUF1275
DUF2828
Motif
Other DBs
NCBI-GeneID:
118805614
NCBI-ProteinID:
XP_036422458
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MKLPCWMALALLLAHSVATQRSSSRPVDEESSGDDFYDDEDLFSGSGSGYPEVEVSPTEK
GVSFTTEEPLPLSTTQATGPAPSAPPAAEPSSTPPPETERESGKERERERERERERERER
ERERERERERERERERERERERERERVRTRTTIEPRYPTVPVVITDSPVTLGDTEDLSTA
EEEEDLFITTETSPPYDPFSTEETLTDDITTTEVLPTTVASTTAQPTTSPTTPSTAPVRP
QKPQTTPSRARPTESSARPVLTSTVQVRSPESTVNNEVAAAGPSGDSEIREDEGREGNEV
GRGKGVTDTGAEPDLTGNTIDTGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVM
LLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcccgtgctggatggctctcgcgctgctgctcgcgcactccgtggcgacacag
cgtagttcatcacggccagtggatgaggagagctctggagatgacttctacgatgatgag
gaccttttctctggttcaggctctggctacccagaagtagaagtaagtcccactgaaaag
ggtgtgtccttcaccacagaagagcccctcccactttcaacaacacaggccactggaccc
gccccctctgccccaccggctgcagaacccagcagcacccctccaccagaaactgagaga
gagagtggtaaggagagggaaagagagcgagaaagggaaagagagagggagagagagcgt
gaaagagagcgagagagggagagagaacgagaaagagaaagggagagagaacgtgaaaga
gagagagaaagagagagagtaaggacaaggactacgattgagccccggtaccctacagtt
cccgtggtgattacagactctcctgtaacactgggtgacacggaggacctgagcactgca
gaagaagaggaggatctcttcatcaccacggaaacatcacctccatatgatccattcagc
actgaggaaaccttgacagatgacatcactaccacagaggttcttcccaccactgttgcc
tccaccacagctcagcccaccacgagtccaaccacgcccagcactgcccctgtgcggcca
cagaaaccgcagaccacacccagcagagccagacccactgaaagcagcgcacgaccagtg
cttacctctacagtacaggtgaggtctccagagtcaacagtaaataatgaagttgcagct
gcaggtcccagtggggattcagagatccgagaggatgaaggtcgggaaggcaatgaagtg
ggacgaggcaaaggtgtgaccgacacaggggcggagcctgatttgactggcaacacaata
gatacaggaagttcagctgctcagcttcctcagaagaacatcctagaaaggaaagaagtt
ttgatagcggtgattgttggaggtgtcgttggtgcgctcttcgccgcattcctggtcatg
ttacttgtttaccggatgaagaagaaggatgaaggcagctacactctggaggagcccaaa
caagccacagtcacctatcagaaaccagacaagcaggaggaattctacgcctag
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