Colossoma macropomum (tambaqui): 118805702
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Entry
118805702 CDS
T09004
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03440
Homologous recombination
cmao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118805702 (top3a)
03460 Fanconi anemia pathway
118805702 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmao03032
]
118805702 (top3a)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118805702 (top3a)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
118805702 (top3a)
DNA replication proteins [BR:
cmao03032
]
Eukaryotic type
DNA Topoisomerases
118805702 (top3a)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
118805702 (top3a)
FA (Fanconi anemia) pathway
118805702 (top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
118805702
NCBI-ProteinID:
XP_036422596
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MNFITRTLLRVTAQSRFCRQISISMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGRARRRE
GFSVYNKIYEYEYNLFGQNVSVSMTSVSGHLLALEFKAPFQKWHSCNPVLLFDAEVEKYC
PENFVQIKRTLEREARQCQALVIWTDCDREGENIGYEIIDVCKAVKANIQVFRARFSEIT
PNSIRRACESLTEPDINVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPDSLSNQLISYG
SCQFPTLGFVVERFKAIQAFIPETFFKIKVVHEPSEEESVEFSWKRHRLFNHTACLVLYQ
MCMEDPMATVISVISKPKSKWRPLPLDTVELEKLASRKLRISAKETMKIAEKLYTQGFIS
YPRTETNMFPTNLNLVPLVEQHTEDNEWGPFAQGILDSGGPTPRNGNKSDQAHPPIHPTK
YTNSLQGNEKRLYEFIVRHFLACCSKNAEGKEVIVDIDIAQEKFSASGLTIIARNYLEVY
PYDKWYNKVIPLYTPNTTFQPTAIEMVEGQTSPPQLLTEADLISLMERHGIGTDATHAEH
IETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKD
KASVLRHHVAKYKAVFIESVRKAKKLDEALSSYLGQAQEYTEQEEQELEMPLPVRKCPQC
NRDMVLKKRKEGTGKFLSCMGYPACKAAVWFPDTVLEVSRDDSICPTCRPHPVHMLTFKF
KRGSLPPGMDLEFVGCIGGCDETLREVLNLKYLRGGGDSATQVNHSSASRQSNPPRTNSA
LQSRSENRPPPPRLNTDSSRPPLPSSTQAWPMQPPSSVQGNAVVCNCGQDALLLTVRKEG
PNQGRQFYKCNTGNCKFFLWADQPNDQHRPAASRGSIGHSSQPPRPSLGFGNAPQQRQSS
RGSAGDGGETMCNCNEPAVQRTVMKDGPNKGRMFHTCGKPRDQQCGFFQWADENVAPVAV
GNAGGDNKKWNGSRKTGASSSRAPTAKRQRTCGICHEPGHTRTTCPQGR
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaactttatcacacggacactgcttcgagtgacagctcagagtcgattctgtagacaa
atatccatcagtatgatcaggagaactcagattaagaaggtgctttgtgtcgctgagaag
aacgatgccgccaaagggatcgcggagattatgtcaaatggcagagcaaggaggagagag
ggcttctcggtctacaacaaaatatatgagtatgaatataatctttttggacaaaatgtt
tctgtctccatgacatctgtgtcaggacatcttttagcccttgaattcaaagccccattt
caaaaatggcacagctgtaatccagtgctgctgtttgatgcagaggtggaaaagtattgc
cctgagaactttgtgcaaataaagaggaccttggagagagaggccagacagtgccaggct
cttgtcatttggactgattgtgacagagaaggagaaaacattggttatgagatcatcgat
gtctgcaaagcagttaaggccaacattcaagtgttccgtgctcggttctctgagattacc
cccaactccattaggagagcatgtgaatctctgactgagcctgacatcaatgtcagtgat
gcagtggatgtcagacaggagcttgatctgcgtattggagcagcatttacaaggttccag
accttacggttgcaaaagatcttcccagactctctttctaatcagctcatcagctatggg
agctgtcagtttcctactcttggatttgttgtggagaggttcaaagccattcaagccttc
atccctgagaccttctttaaaattaaagtggtccatgagcctagtgaggaggaatcggtg
gagttcagctggaaaagacatcgtctgttcaatcacactgcctgccttgtgctttaccag
atgtgtatggaggatccaatggcaacagtgatttctgtaataagtaaaccaaaaagcaaa
tggcgacctttaccccttgacactgtggaacttgagaagctagcttcaaggaagttaagg
ataagtgcaaaggagaccatgaaaatagctgaaaagctatatacccaagggtttatcagt
tatcctcgtactgagaccaacatgtttcccacaaacctgaatttggttccgcttgttgag
cagcatactgaggacaatgagtgggggccttttgcgcaaggcattttggatagcggtggg
cccacacctcggaatggaaacaaatctgaccaggcccatcctcccattcaccccactaaa
tacacaaatagtctacagggaaatgagaagcggttgtacgagtttatcgttcggcacttt
ctggcctgttgctccaaaaatgcagagggcaaggaggtgattgtcgacattgacattgct
caggagaaattctctgcaagtggactcacaatcattgctaggaactatcttgaagtttac
ccctatgacaagtggtataataaggttattccattatatacgcccaacacaacatttcag
cccacagcaattgagatggtggaaggacagactagcccaccacaacttctgacggaggct
gacttgatttctctgatggagaggcatggcattggaaccgacgccacacatgctgagcac
attgagaccatcaaaagccgcatgtatgtgggcctaacagcggatcagaggttccttcct
ggagagcttgggatggggctcgttgaggggtacaattccatgggctatgagatgtctaaa
ccagacttgagggcagaactggaggcagatctgaagcttgtgtcagaggggcggaaggac
aaggcgtctgtcctcagacatcatgtggcaaagtacaaggctgttttcatagagtctgtc
aggaaggcaaaaaaactagatgaggctctgtccagttatttgggccaggcccaagagtat
acagagcaagaggaacaagaattagaaatgcctctaccagtgcggaagtgtccgcagtgc
aaccgggatatggtcttgaagaagaggaaggaaggcacggggaagtttctgtcatgcatg
ggctacccagcctgtaaggcagcagtgtggtttccagatacagtgttggaggtcagcaga
gatgacagcatctgtccaacatgtcgcccacatcctgtccacatgctgacgttcaagttc
aagaggggaagcttacctccaggaatggatcttgagtttgttggatgcattggtggctgt
gatgagaccctaagagaggttctgaatttgaagtatctcaggggaggaggagattccgcc
actcaggttaatcacagttcggcttcccgtcagtctaatcctccaagaaccaattcagca
cttcagtccagatctgagaacaggcctccacctcccagactaaatacagacagcagtagg
cccccactgcctagttccacacaggcgtggcccatgcagccaccttcttctgtccagggc
aatgctgtggtatgtaactgcggtcaggatgcacttcttctcacagttcgtaaagagggt
cccaaccagggtcgtcagttctacaagtgcaatacggggaactgtaagttcttcctttgg
gcagatcagccgaatgaccaacacagaccagcagcaagcaggggatcaattggacacagc
tctcaacctcccaggccttcacttggctttggaaatgcacctcagcagaggcaaagcagc
agaggatcagcaggagacggaggagaaactatgtgtaactgtaatgaacctgcagtccaa
aggaccgtcatgaaagacggaccaaacaaaggcaggatgttccacacatgtggtaaacca
cgggaccagcagtgcggtttctttcaatgggcagacgagaacgtggctccagttgctgtt
ggaaacgctggaggagacaacaagaagtggaatggcagtaggaagactggagcctcttcg
agcagagcccccactgctaaaaggcagagaacttgtggaatttgccatgagccaggccac
acacggaccacctgtccacagggccggtga
DBGET
integrated database retrieval system
