Colossoma macropomum (tambaqui): 118805901
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Entry
118805901 CDS
T09004
Symbol
srsf4
Name
(RefSeq) serine/arginine-rich splicing factor 4
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118805901 (srsf4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118805901 (srsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118805901 (srsf4)
Spliceosome [BR:
cmao03041
]
Common components
Common spliceosomal components
SR proteins
118805901 (srsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118805901
NCBI-ProteinID:
XP_036422946
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MSRVYIGKLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDL
CGERVIVEHTKGPRRDGGYSSGRSNWYGRGGRDRYGPPTRTDYRLIVENLSSRCSWQDLK
DYMRQAGEVTYADTNKGRRNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLIEDRPSARR
RRSYSRSCSRSRSPSRNRRSRKSRSRSPSRSRSYSRPAVSRSRSRSLSKKNPNRKKREEE
ERSNEDHAIREMQGCRDEARSRSRSRSFKRKKGKQESKRSHKESRSRSRSCSRSCSKMGS
NRDGSKKSVLKSHEAVKRGDDGTAERTLHSRSRSHSRSQSPSASKAWDKSKSHSKSQSHT
PAKGSSRSASAAHSESRSRSCSSSRSPSRSRSRS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagtttacattggaaagttgagttatcgcgcaagggagaaagacgtcgaaaag
ttttttaaaggatatggaaagattttagaagtggaccttaaaaatgggtacggatttgta
gaatttgatgatccccgcgatgcagatgatgcagtatatgacctgaacgggaaggacctg
tgtggggagagggtgattgtggagcacactaagggaccacgacgtgatggaggttacagc
tctggaagaagtaactggtatgggcgtggggggagggacagatatggtccaccaacacgt
actgattacagactgattgtggagaatctctccagccgctgcagctggcaggacctgaag
gactatatgcggcaggctggtgaggtgacatatgcagacactaataagggtcgcagaaat
gaaggagtgattgagtttaggctgtactcagacatgaagagggcactggagaaactggat
ggcactgaggtgaatggcagaaagatccgtctgattgaggaccgccccagtgccagacgt
agacgctcatattcacgcagctgcagccgctccaggtctccttcgaggaataggaggtcc
cgcaagagccgcagccgtagccccagcagaagtcgctcctattccaggcctgcagtctcc
cggtcccggagcagatctttaagcaagaagaatccgaataggaaaaagagggaggaagag
gagcgtagcaatgaagatcatgctattcgggagatgcaaggatgccgtgacgaggccagg
agtcgcagcaggagtcgtagctttaagagaaaaaagggcaaacaggagagcaagaggagc
cacaaagagtcacgctctcgatccaggtcctgttccaggtcttgctccaaaatgggcagc
aacagagatggctccaaaaagtctgtcttaaagagtcatgaagctgtgaagaggggtgat
gatggaacagcagaaaggaccttgcattccagatcgcgttctcactccagatcccagtct
ccctctgcttccaaagcctgggacaaatccaaatcccactccaagtcccagtcacacacc
ccagctaagggcagcagtcgctctgcttcagcagcacactccgagtcccgctctagatcc
tgttcaagctcaagatccccatcacgctcacgctctcgatcatga
DBGET
integrated database retrieval system
