Colossoma macropomum (tambaqui): 118805910
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Entry
118805910 CDS
T09004
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03320
PPAR signaling pathway
cmao04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118805910 (rxrba)
03320 PPAR signaling pathway
118805910 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118805910 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cmao03310
]
118805910 (rxrba)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
118805910 (rxrba)
Nuclear receptors [BR:
cmao03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
118805910 (rxrba)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
118805910
NCBI-ProteinID:
XP_036422955
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPPSGQRSPPLASLAAAMTSLPPITSAVNSPISSIGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPFGLKQLSSHSPGPTLS
QKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCMVDKRQRNRCQYC
RYQKCLAMGMKREAVQEERQRNKERDGEAESTSAVNEEMPVEKILEAEMAVEQKTEMHSD
GSSVASSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASF
SHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEVGAIFDRVLTELVSKMRD
MQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEAYCKQRYPDQQGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcagagattctcgcagtccagacagctcctctgtgtcgtcaccaccttca
ggccagcgttcacccccactggcttccttagcagctgccatgacctcattgcctcctatt
acctcagcggtcaacagtcccattagtagcataggatcacccttctctgtcatcagttct
tcactgggctccccatgcctacctgggacaccctccgtgggctatggccctatcagcagt
ccccaaatcaattccactgtgtcaatgtctggtctacatgctgttagcagttcagatgat
gtaaagccaccgtttggcctgaagcaactttcgagccacagtcctggacccacgctttct
cagaaacgcctttgtgcaatttgtggtgaccgctcctctggtaagcactatggtgtgtac
agctgtgagggatgtaagggcttttttaagcgcactgtgagaaaggacttgagctacact
tgcagagataacaaggactgtatggtcgacaagcgccagaggaaccgttgccagtactgc
cgctaccagaagtgcctggctatgggcatgaagagagaagccgttcaggaagagcgtcag
aggaacaaagagcgagatggggaagcggagtctaccagtgcagtgaatgaagagatgcca
gtagaaaagattctggaagcagaaatggctgtggaacagaaaacagaaatgcattctgat
ggaagctcagtggccagctctccaaatgatcctgtcactaatatctgccaggcagctgac
aaacagctcttcactcttgtggagtgggccaagaggatcccacatttctcagaactgcct
ttggatgatcaggtcatcctcctgcgtgctggctggaatgagttgctgatcgcttcattt
tcccatcgctccatcacagtaaaggacggcattctgttggccactggtctccatgttcac
aggaacagtgcacacagtgcaggtgttggagctatctttgacagggagagtgcgcacaat
gcagaggttggggccatatttgacagggtgctaactgaactagtgagtaaaatgagagat
atgcagatggacaagactgagttgggctgtctgagagccatcatccttttcaacccagat
gcaaaggggctgtccagcccgagtgaggtggaattgctcagagaaaaagtctatgcatct
ctggaggcttattgcaagcaaagataccctgaccagcagggcaggtttgccaagcttctc
ctccggttgccagccctgcgatccattggcttaaagtgcttggagcacctgttctttttc
aagctgattggtgacactccaatcgacaccttccttatggagatgctggaggctccccat
cagctgacctaa
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