Colossoma macropomum (tambaqui): 118805966
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Entry
118805966 CDS
T09004
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118805966 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmao04990
]
118805966 (snx27a)
Membrane trafficking [BR:
cmao04131
]
Protein recycling
Others
Others
118805966 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
cmao04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
118805966 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
VirE3
SNX17_FERM_C
SNX17-31_F2_FERM
USP7_C2
Motif
Other DBs
NCBI-GeneID:
118805966
NCBI-ProteinID:
XP_036423068
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MADSEGDEVRTAPPASLSAAPRNGPATGSATTTAGPRIVRIVKSESGYGFNVRGQVSEGG
QLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHKQVVDLIRAGE
KELVLAVLSVPPQEVDGLESGEDGSAPPNYDYSDKQAVPISIPTYKHVEQHGERFVVYNI
YMSGRQLCSKRYREFAILHQNLKREFATYSFPKLPGKWPFSLSEQQLDARRRGLEEYVER
VCSVRAIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVKVRKNSTTDQVYQALV
IKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFSTQ
EHELLRDNPLALHYCFHQAQDDVKKGFIKAEDKSYQLQKLAEQRKMATYLSLLRTCEGYN
EVMFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWPEMQRWDTDEEGMA
FCFEYARGEKKPRWVKIFTPYFNYMHECFERIFCELKWRKEVEEEASDKDNKNCSNNEYL
SPLEQQKGWRHLGGEIATS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcggactccgagggagacgaggtccggaccgctcctccggcgtcgctcagcgcggcg
ccccgcaacggacccgcaacaggctcggccacaaccacggcgggtccgcgtatcgtccga
atcgtgaagtcagagtcgggctacggcttcaacgtccgcggccaagtaagcgagggcggc
cagctgcggagcatcaacggcgagctgtacgcgccgctccagcacgtcagcgccgtgtta
ccggggggcgcggcggaccgggcaggaatctccaaaggagaccggattctggaggtgaat
ggagtgaatgtggaaggtgctactcataagcaggtggtggatctgatccgagctggagag
aaggagctggtgctggccgtactatctgtgccaccgcaagaagtggacggcctggaatca
ggagaggatggctctgctccgcccaattatgactacagtgataagcaggcagtgcccatc
tccattcccacctacaaacatgtggagcagcatggggaaagatttgtggtgtacaacatc
tacatgtctggcagacagctatgctcgaagcgctaccgggagtttgcaatcctgcaccaa
aacctgaaaagagagtttgccacctactccttccccaagctacctggaaaatggcccttc
tccttgtcagagcaacagctggatgcccgcaggagaggattggaggagtacgtggagaga
gtgtgctcagtaagggccatcggggagagtgacattatgcaagagttcctgtctgagtcg
gatgagaactataatggtgtaacggatgtggagttgcgaatagcactgcctgataagacc
accatttctgtgaaagtgcgtaagaacagcaccactgaccaagtttaccaggcactagtc
ataaaggttggaatggacagcatcatggccagttactttgccctttttgaggtgatcaac
cactccttcgttcgtaagttggctcccaatgagttccctcataagctgtacgtgcagaac
tacacctctgcagtgccggggacctgcctggccctgcgcaagtggctcttcagtacccag
gagcacgagctgctgcgggataaccccttggctctgcactactgcttccaccaggcccag
gatgatgtgaagaagggattcatcaaagcggaggataagtcctatcaacttcagaagcta
gcagagcagagaaagatggccacatacctgagtctgctgcgcacgtgcgagggctataat
gaagtcatgttccctcactgctcatgtgattcgcggaggaaaggtcacgtgatcaccgcc
atcagtatccaccacttcaaactgcacgcttgcactgaagatggcacactggagaatcag
gttatagccttcgaatggccggagatgcagaggtgggacactgatgaggagggcatggcg
ttttgctttgagtatgcaagaggggagaaaaaacctcgctgggtcaaaatcttcactcct
tattttaactacatgcatgagtgctttgagaggattttctgtgagctcaagtggcgaaaa
gaggtggaagaggaggcttcagacaaggacaacaagaactgcagcaacaatgagtacctc
tctccgctggagcaacaaaagggatggcgccacctagggggcgagatagccacctcttaa
DBGET
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