Colossoma macropomum (tambaqui): 118806003
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Entry
118806003 CDS
T09004
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118806003 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118806003 (cnot3b)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118806003 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118806003 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
118806003
NCBI-ProteinID:
XP_036423139
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFDDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVDNRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTATIDMLNMQVDQFESEVESLSAQARKKKGDKEKQDRLEELKRLIERHRYHI
RMLETILRMLDNDSVQVEAVRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPQTLVA
TSPPAHTEDETFQHSSSTPTSTTSSSPIPPSPATCTTNSEDDKKRGRSTDSEFSQSPVKN
GNPSSLSSSSSSSSSSSSSSSGASSTSVVSMAAIASSGGSAIGGNSLLGSMGGLLQNSCS
YSSAIQQQSQQSQQQHQPKNTINSQSSAATTNSNSVLLPTPTSASSPPNTSTPSCQVQPP
LGPTSVSNLGHNLGLGLGLGKSAVTATSGASQIPSLGLSGMPASMNSMAGLLRGSTPAPY
AQAAASGTVASGLPGSVGANASSTNSSGTVPSVGANGSVTSVGLLGPAPGVTGVSSGILG
LGSTQTAVQPSPLVVPSPVGGALTQGSSVGVIGSNGGNSGSGSTASMGSAGLPRPPSGQK
QNGGTTYSAVVADSTSDSALNSASQSQNSQASSLNSTASLPKDSGSSLLGAMTLPPSSPS
PSYSESKPSGGSLLNGPHSYTPAADVIKPQESLSTLKSMAERAAQGTGLEGELSALHLTG
DIFPSSTAPSGPSAAPQPSLSEVNIPPSLGVCPLGPVPLSKEQLYQQAMQESAWTHMPHP
SDSERIRQYLMRNPCPTLPFHHQVPPPHSDSVEFYQRLSTETLFFIFYYLEGTKAQYLAA
KALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLE
DRDLQ
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaactacaaggagaaattgatcgatgtctgaaaaaagtagcagaa
ggagtggagcagtttgatgacatctggcaaaagcttcacaatgcagccaacgccaaccaa
aaagagaaatatgaggctgacctcaagaaagagattaaaaaattacagcgccttcgagac
cagattaagacgtgggtggcctccaacgagatcaaagacaaaaggcagctagtggacaac
cgcaaactcatagagacgcaaatggagcgctttaaaatcgtagagcgggagacaaaaacg
aaagcgtactccaaagagggactcggccttgctcagaaagtagaccctgcacaaaaagaa
aaagaagaggttggacagtggctcacggcaacgatagacatgttaaacatgcaggtggac
cagtttgagagtgaggtagaatcactctcagcccaggcaaggaaaaagaaaggagataaa
gagaaacaggaccggctagaggagttaaagaggttgatagagcggcaccgctaccatatc
cgtatgctggagaccattctgagaatgctggacaatgactcggtacaagtagaggcagtc
cgcaagatcaaagacgatgtggagtactatctagattcctctcaggatcctgactttgaa
gagaacgagttcctctacgatgacctggatctggaggatataccccaaacgttggttgcc
acgtctccgccagctcacacggaggatgaaaccttccagcactccagttccacaccgacc
tccacaacctcatcgtctcccatccccccatccccagctacttgcactacgaattcggag
gatgacaagaagcgaggacgttccactgacagtgaattcagccagtctcctgtgaagaat
ggcaacccatcatctctctcctcctcgtcctcatcgtcatcctcatcatcatcttcatcc
tcgggagcctcctcaacctcagtggtgtctatggcagccattgccagcagtggcggatca
gcgatcgggggcaacagcctcttgggcagcatgggtggcctccttcagaactcttgcagc
tacagttctgccatccagcagcaaagccagcagagccagcagcagcaccagcctaaaaac
accatcaactcccagtctagtgctgccaccaccaactctaacagtgtcctcctacccacc
cccacctctgcttcctccccacccaacaccagcacaccaagctgccaggtgcagcctccg
ctggggcctacttcagtctccaatctgggccacaacctgggcttgggcttgggcttgggg
aagagtgccgtcacggcaacaagtggtgctagtcaaatcccaagccttggcctttcaggg
atgccagcatccatgaacagcatggcggggctcttgcgaggctccaccccagcaccttac
gctcaggccgccgcctcgggcacggtggccagcggcttaccggggtccgttggggcgaat
gccagcagcacaaactctagtggaacagtaccctctgtgggagccaatggaagtgtcact
tccgtgggtctgttaggcccagcacctggtgttacgggggtcagcagtgggatattaggt
cttgggtccacgcagactgctgtgcagccttcccccctggtggtacccagccctgtggga
ggggccctgacgcaggggagcagcgtgggcgttatcgggagcaatggcggaaactctggg
tcaggaagtacagcaagtatgggaagtgctgggctcccacggccacctagtggacaaaaa
cagaatggcggcacaacttacagtgccgtagtagcagatagcacatcagactccgccctc
aacagtgccagccaatcacaaaacagccaagcctcatctttaaattccacagccagtctg
cctaaagatagtgggtccagtcttttgggggcaatgactctccctcccagttcaccctcg
ccctcatacagtgagagtaaacccagtggaggcagcctgctcaatgggcctcactcttac
acaccggctgccgatgtcattaagccccaggagtcacttagtaccctgaaatcaatggca
gagagggcagctcagggcacaggtttagagggagaactctctgcactacatctaactgga
gatatcttccccagctctacagccccttctggtccctcagcggcccctcagccttctctg
tcggaggtgaacatccctccatcactgggggtctgtcccctgggtcctgtccccctctcc
aaagaacagctctaccagcaagccatgcaggagtcagcctggacacacatgccccacccg
tccgactcagagaggatcaggcaatacttgatgaggaacccctgtcccacattgcctttc
caccaccaggtgccgccaccacactcggactctgtggagttctaccagaggctgtccacg
gagaccctcttcttcatcttctattacctagagggcacaaaggcccagtatctggcagcc
aaagccttgaaaaaacagtcatggaggttccatacaaagtatatgatgtggttccagagg
cacgaagagcctaagaccatcactgacgagtttgagcaggggacctacatttactttgac
tatgagaaatggggccagaggaaaaaggaaggattcacgtttgagtacaggtacctcgag
gaccgggacctccagtga
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