Colossoma macropomum (tambaqui): 118806068
Help
Entry
118806068 CDS
T09004
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
118806068 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118806068 (hdac5)
Enzymes [BR:
cmao01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118806068 (hdac5)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
118806068 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
118806068
NCBI-ProteinID:
XP_036423267
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MLLRPTVPGLCAMLQTIYETESCFSTDAHSTASREQPTELLPHSTTNNMSSTDSPDDAAV
MSKAFFAVEVKSSLSSGMQSPVGGGGGEQGGGGGGGGGPVDLRTELRADPRLSALSGMDP
ALREQQLQHELLLLKQQQELQKQLLFAEFQKQHEVLTRQHEAQLQEHLKQQQELLAVKRQ
QELEQKRKLEQQRHEELEKQRLEQQLIMLRNKEKGKESAIASTEVKLKLQEFLLSKKEPP
SGGLNHSFPQKCWGAHHTSLDQSSPPQSNTPGTPPSYKLPPLLGAYEGKDDFPLRKTASE
PNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSS
NSAIAENGSSGSVPNIHAEQLRSLHQSLNADGTASPLSLYTSPSLPNISLGLPANAHITA
PQKLTVQQDAERQALQSLRQGGALTGKFVSTSSLPAHDPDPPAPTNSHSTHSSLLQHVLL
LEQARQQSALLAVPMYGQSPLVTGERVSNNMRTVTKLPRHRPLSRTQSAPLPQTPQALQH
LVMQQQHQHFLEKQKHYQLNKILSKGAELPRQPPTHPEETEEELTETAEMPDERGEGPEH
VREGLHKESSGETTPPSERVVPLKGESTESDLEEEDDEDEAIELKECDEEAGPYGQFSEQ
QHLQQLNVFQASLSITGMPHRPLGRAQSSPITSSLKGTPMSELPIKHLFTTGLVYDTLML
KHQCMCGNTHIHPEHAGRIQSVWSRLQETGLLGRCERIRGRKATLDEIQTVHSEYHTLLY
GTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELA
FKVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAVTAKLLQQKLGVGKILIVDWDIH
HGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPEEVGVGPGVGFNVNIAWTGGVDPPM
GDVEYLTAFRTVVMPIANEFSPDVVLVSAGFDAVEGHQSPLGGYNVTAKCFGHLTKQLMK
LAGGRVVLVLEGGHDLTAICDASESCVAALLGDELDPLPQTVLQQKPCPKATASLERVIE
IQSEHWASVQRSAPTVGQSLLDAQRREKDEADTVTAMASLTVDTEQSAASSQSSRAAEEP
MEEEPVL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgctcttacggccaacagtgccggggctgtgcgcgatgttgcagacgatttatgagaca
gaatcctgcttctccacagacgcacacagcacagccagccgggaacagcccactgaactg
ctgcctcacagcaccaccaacaacatgagcagcaccgattccccagatgacgcagcagtg
atgtcaaaagcttttttcgcggtggaggtcaagagctcactgtcctctggcatgcagagt
ccagtcgggggaggaggtggcgagcagggtggaggtggtggaggaggaggagggccggtg
gatttgcggacagagctgcgggcagaccctcgtctgagcgctctcagcggtatggacccg
gcgctgagggaacagcagctccagcatgagctgctgctgttaaagcagcagcaggagctt
cagaagcagctgctcttcgccgagttccagaagcagcatgaggtccttacccgccaacat
gaggcccagctgcaagagcacctcaagcagcagcaggagctgttggcagtaaagcgtcag
caagagctggagcagaagaggaaactggagcagcagaggcacgaagagctggagaaacag
aggctggagcagcagctcatcatgcttcgcaacaaggagaaaggcaaagagagtgccatc
gccagcactgaggtcaaactaaagctccaggagttcctgctgagcaaaaaggaacccccc
tctggcggactcaaccattccttcccccagaagtgctggggtgcccaccacacatctcta
gaccagagttcccctccacagagcaacaccccaggcaccccaccgtcttacaaactgccc
ccactgctgggggcctatgagggcaaagacgacttccctctccgcaagactgcctccgag
cccaatctgaaggtgcgctcccgattaaagcagaaggtggctgaaagaaggagcagccct
ttgctccgccgcaaagacggcactgtgatcagcacctttaagaagagagccatcgagatc
tcagtctcctcaatgtgcagcagtgctcctggctctggccccagctccccaaacagctcc
aacagtgccatcgcagagaacggctccagtggctctgtcccaaacatccacgctgagcag
ctgcgttctctgcaccagtctctgaatgcggacgggacagcaagccccctcagtctgtac
acctctccatctctgcccaacatctctttgggactgccagctaacgcacacatcaccgcc
cctcagaagctgaccgtccagcaggatgcagagcggcaggctcttcaatcccttcggcag
ggcggagctctgacggggaaatttgtgagcacctcgtctctgccggcccacgacccagac
cctccagcccccacaaacagccacagcacacactcctccctcctgcagcacgtcctgctg
ctggaacaggcccggcagcagagcgccctgctcgcagtgcccatgtatggccagtcgcca
ttggttacgggcgagcgagtgtccaataacatgcggacagtgaccaagctgccgcggcac
cgtccactgagccgtacgcagtcagctccgttaccacagacgcctcaggccttgcagcac
cttgtcatgcagcagcagcaccagcacttcttggagaaacagaaacactaccagctcaac
aagatcctctccaaaggtgcggaacttcctcgccagcctcctacccatccagaggagacg
gaggaggagctcaccgagaccgcagagatgcctgatgaacgaggggaggggcctgagcat
gtgagggaggggctacataaagaaagttctggtgagaccacgcccccttcagaacgcgtg
gtcccactgaagggcgagagcacagagagcgacctggaggaagaggatgatgaagatgaa
gccattgagctgaaggagtgtgatgaggaggctggcccctatgggcagttctcggagcag
cagcacctgcagcagctgaatgtattccaggcttctctgtccattacgggaatgccccac
aggcctctgggacgggcgcagtcctcccccatcacctccagtcttaaagggacacccatg
agcgaactacccatcaagcacctcttcactacagggctggtgtatgacaccctcatgcta
aagcatcagtgcatgtgtgggaacacacacatccaccccgagcatgctggcagaatccag
agtgtgtggtccagactgcaggagaccggcctgctgggccgctgtgagaggatccggggc
aggaaggctacgctggatgagatccagacggtgcactcggagtaccacacactgctctac
ggcaccagcccgctcaacaggcagaagctagacagcaagaagctcttaggtccaatcagt
cagaaaatgtatgctgtactgccatgtggaggaattggggtggacagtgatacagtgtgg
aatgagatgcactcttcaggtgccgtgcgaatggcagtgggctgcgtcatcgagctggcc
ttcaaagtagcagccggagaattaaagaatgggtttgcggtggtccgtcctcctggtcat
catgcagaggagtccacagccatgggattctgcttcttcaattcagtggccgtcacagcc
aagctgctacagcagaaactgggcgtgggaaaaatcctcattgtagactgggacattcac
catggtaatgggacccagcaggccttttacaatgaccccaacgtgttgtacatctctctg
caccgctacgatgacggcaacttctttccaggcagcggggctcctgaagaggtgggagtg
gggccaggtgtgggctttaatgtgaacattgcctggacaggaggagtggaccctcccatg
ggagatgttgagtacctcacagccttcaggacagtggtaatgcccatcgccaacgaattc
tcccctgacgtggtgctggtgtcggctggcttcgacgccgttgagggccaccagtcccct
cttggtggctacaacgtcaccgccaaatgcttcggtcacctgaccaagcagctgatgaag
ctggcaggcggtcgtgtggtcttggtgctggaggggggtcatgaccttacagctatctgc
gacgcctcagaatcctgcgtggctgctttgctcggcgacgagttggatcctctgcctcag
actgtgcttcagcagaaaccctgtccaaaagccacagcttcccttgagagagtcattgaa
attcagagtgaacactgggcctcagtgcagcggtcagctccaacagtaggtcagtccctg
ctggacgctcagcggcgggaaaaggatgaggccgacacagtgacggccatggcctctctc
actgtggacacggagcagtcagcagcctcctcacagagcagcagggctgccgaggaacca
atggaagaggagcctgtgttgtag
DBGET
integrated database retrieval system
