Colossoma macropomum (tambaqui): 118806333
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Entry
118806333 CDS
T09004
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b
KO
K16499
protocadherin delta 2
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmao04515
]
118806333 (pcdh18b)
Cell adhesion molecules [BR:
cmao04515
]
Cadherins
Protocadherins
118806333 (pcdh18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
He_PIG
Motif
Other DBs
NCBI-GeneID:
118806333
NCBI-ProteinID:
XP_036423638
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MSSAAPLLLCAALLLLLRLAAPSAPGKTVRYRVLEEQRVGTVIGRLLEDAASALSGLPSS
VSPRFRAMNGGATPLLSVREEDGEISVASRIDREALCAQQPNCTIELDVATLPTEHLRLF
RVRVDVLDVNDHAPRFARAVVPVEISESAAVGTRVPLDGAWDPDVGENALRSYSLARSDH
FRLEVRARADGSRRAELVVARELDREARAAHELQLTAADAGAPPRTGSTLLRIRVLDSND
NSPAFEQQAYAVSVPESAPPGTLLVDLNATDPDEGSNGKVVYSFGTHVAQKILDTFRIDP
ETGHLTLVKKLDYEASASYEIDAQAQDMGPNSVPGHCKVVVKVVDVNDNKPRISVNLMSQ
GKEEVAYVSEAAPVDTFVALVRVDDSDSGPNGEVSCRLHGHGHFRLQKTYENNYVILTNV
SLDREKRSEYSLTVIAEDHGSPSLSAVKHFTVQVQDENDNPPRFEKGRYEIFKSENNSPG
AYLTTVVADDPDLGANGQVTYSIVESLVQGSSISTYVTIDPSNGAIYALRSFDREEVGRL
TFTVQAQDGGGGASLSSNTTVVITVLDENDNPPVIVSPLLSNRTAEVPLWRRAEPGHLVT
VIKATDRDSGANAELTCSIVGGNEEGLFLMDPRRCELRTNASLEVSPRDAFDLAILVQDR
GATARLSARAILHVILCDHPESYPLVPPSDGTGQTPLDVSTIVIISLGAICGVLLVVMVA
FATRCSSRDQKDPRHSYNCRVAESTYQNHPKKPARQIHKGDITLVPTVNGTLPVRAHPRS
PSASPAPESRQTHHSRQSLNSLVTISSNHVPENFALELTHATPPVEGQYQPRPSFRGNKY
TRSYRYALNEMDKFSLKDSGRGDSEAGDSDCEMGRESPLLGEGFSELFTPDGQHRLHPAM
KLCTDECRVLGHSDQCWMPPLPSPASSDYRSNLYIPGEDPQQSPAAPEAPQSGESTLRKK
SFSTFGKENEEEGQEDGEAGKGDDLCGTSSLLSEMNSVFQRLLPSSLDSYIEVGETGAAS
TCPAGFGSLERRKGHLPGKPSPATYQQGVAAWAANTHFQNPGHGHAPASHMTAVVAPLPA
ALPTPIQVSTSCSKWLPAMEEIPENHEEDELESVLGHLQGKRCDSRSEIMDASELVAEIN
KLLQDVRQS
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgcggccccgctcctactctgcgccgctctgctgcttttgctgcggctggcc
gcgccgtcggcgcccgggaagaccgtgcggtaccgcgtgctggaggagcagcgcgtgggc
acggtgatcggacggctgctcgaggacgccgcgagcgcgctctccggtctgcccagctcg
gtctctccgcgtttccgcgcgatgaacggcggggcgacgccgctactctccgtgcgcgag
gaggacggcgagatcagcgtggcgtcgcgcatcgaccgcgaggcgctttgcgcgcagcag
cccaactgcaccatcgagctggacgtggccacgctgcccacggagcacctgcggcttttc
cgtgtgcgcgtggacgtgctggacgtcaacgaccacgcgccgcggttcgcccgcgccgtg
gtgcccgtggagatctccgagagcgccgcggtgggtacgcgcgtaccgctggacggcgcg
tgggacccggacgtcggcgagaacgcgctgcgctcctactcgctggcgcgcagcgaccac
tttcggctggaggtgcgtgcgcgggccgacggctcgcgtcgagcagagttggtggtggcg
cgcgagctcgaccgggaggcgcgcgccgcgcacgagctccagctcacggccgcggacgcg
ggcgcgccgccgcgcaccggctccacgctgctgcgcatacgcgtgcttgactccaacgac
aacagcccggccttcgagcagcaggcttatgccgtgagcgtgcccgaaagcgcgccccca
ggcacgctgctcgtggacctgaacgccacggacccagatgagggcagcaatggcaaggtt
gtttactctttcggcactcacgtggcacagaaaatcctagacaccttccgaattgaccca
gagactggccatctgacgctggtcaagaagctggactatgaggcctctgcgtcctatgag
atcgatgcccaggcacaggacatggggcccaactccgtgccaggccactgcaaggttgtg
gtcaaggtggtagatgtaaatgacaacaagccaaggatcagtgtcaacctgatgagccag
ggcaaggaggaggtggcctatgtgtctgaagcagcaccagtggacaccttcgtggctttg
gttcgcgtggacgacagtgactcgggcccaaacggagaggtttcctgtcgactgcatggg
cacggccacttccggctacagaagacgtacgagaacaactatgttatcctgaccaacgtg
tcactggaccgcgagaagcgctctgagtacagcctgacggtcatcgctgaggaccacggc
tctccaagcctgtccgcggtaaagcacttcacggtgcaggtgcaggacgagaacgacaac
ccgccgcgcttcgagaagggccgctatgagatcttcaagtcagaaaacaactcgcctggt
gcctacctcaccactgtggtggctgacgacccggatctgggcgccaacggccaggtgacc
tattccatcgtggagagcctggtccaaggcagctccatctccacctacgtgaccatagac
ccatccaacggtgccatttatgctctgagaagtttcgaccgcgaggaggtaggccggcta
acgttcactgtgcaagcgcaagatggagggggtggagcctctttgagcagcaacaccaca
gtggtcatcactgtgctggatgagaatgataaccctccagtcattgtttcgccactgctt
agcaaccgcactgcagaagtgccactgtggaggcgggcggaaccagggcacctagtgaca
gtcatcaaggccactgaccgggactctggggccaatgctgaacttacctgctccatcgtc
ggtggaaacgaagaggggctctttctgatggaccctcggaggtgcgaactgagaacgaat
gccagcttggaagtttctccacgggatgctttcgacttagccatcctggtgcaggaccgc
ggtgcaaccgcccggctttcggcccgtgctatcctccatgttatattgtgtgaccaccct
gagtcctaccctctcgtgcccccctccgatggcacaggccagacccccttggacgtttcc
accattgtcattatctccctaggagccatctgcggcgtgctgctggttgtcatggtggca
ttcgctacgcgctgctcttctcgtgaccagaaggacccgcgccactcgtacaactgccga
gtggccgagtccacctaccagaaccaccctaagaagccggcccggcagatccacaaaggc
gacatcactctggtgcccacggtgaacgggacactgcctgtaagggcgcatcctcgctca
ccctccgcctcgcctgcaccagagagccggcaaacccaccacagccggcagtcgctcaac
agcctcgtcaccatctcctcaaatcacgtgccagagaacttcgccctggagctcactcac
gccaccccaccagtggagggccagtaccaacccagacccagtttccgtggcaacaaatac
actcggagctacaggtatgctctaaatgagatggacaagttcagtctgaaggacagtggc
cgaggggacagtgaggctggagacagtgactgtgagatgggcagggagtcgcctctgctg
ggagaaggcttcagtgagctgtttacacctgatggacagcacagactacatccagcgatg
aagctgtgtacggacgagtgccgtgtcctgggtcactctgaccagtgctggatgccccct
ctgccctctccagcttcttctgattaccgtagcaacctatatattcccggagaggacccc
cagcagagcccggcggccccggaggccccccagtctggggagtccaccctgaggaagaag
agcttctccaccttcggcaaggagaatgaggaggagggccaagaagacggcgaggcaggg
aaaggagacgacctgtgtgggacctcgtcgctgctgtccgaaatgaacagcgtcttccag
aggctcctcccatcctccttggactcctacatcgaggttggcgagacaggagccgcttcg
acatgcccagccggatttgggtcgcttgaaaggaggaaaggtcacctgcccggtaaacct
agccccgccacctaccagcaaggtgtggctgcctgggctgccaacacacacttccagaat
cctggccatggccatgcacccgccagtcacatgaccgctgtggtggcgcctctacccgcg
gctctaccaacacctatccaggtgtcgacttcctgttcaaaatggttgccagccatggag
gagattccagagaaccatgaggaagatgagctggagtccgttctgggccacctacagggc
aaacgctgcgacagccgcagcgaaatcatggacgccagcgaactcgtggcagagatcaat
aaactcctgcaagatgtccggcagagctag
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