Colossoma macropomum (tambaqui): 118806463
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Entry
118806463 CDS
T09004
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118806463 (sox3)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118806463 (sox3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
DUF4799
Motif
Other DBs
NCBI-GeneID:
118806463
NCBI-ProteinID:
XP_036423785
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MYNMMETEIKTPLPPQTTGSAAGGKSGAGGGGGGAADQERVKRPMNAFMVWSRGQRRKMA
QENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLL
KKDKYALPGALLAPGAGAVMGGAGGGGGVGSAAAAAAAAAAQRMDGYAHVNGWANGAYSL
MQEQLAYPQHHGMGAPQLQAPMHRYDVTGLQYPMMSSAQTYMSAAPTYSGVAPAYAQQSA
GAVGLGSVGSACKTEPSSPPPAVASHSQRACLGDLRDMISMYLPPGGDSAEHAGLQGSRL
HSVHPHYQSAGTGVNGTLPLTHI
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagattaaaacccctctgccgccgcagaccacgggctcg
gcggcgggcgggaagagtggcgctgggggcggcggaggtggagccgcggaccaggagcgc
gtgaagcggcccatgaacgccttcatggtgtggtcgcgcggccagcggcggaagatggcc
caggagaaccccaagatgcacaactcggagatcagcaagcgcttgggcgccgactggaag
ctgctgaccgacgccgagaagcggccgttcatcgacgaggccaagcggctgcgcgcgatg
cacatgaaggagcacccggattacaagtaccggccgcggaggaagaccaagacgctgctg
aagaaggacaagtacgcgctgccgggcgcgctcctagcacctggcgcgggcgcggtgatg
ggcggcgcgggcggaggagggggcgtcgggagcgcggcggcagcggcggcggcggccgcg
gcgcagcgcatggacggctacgcgcacgtgaacggctgggcgaacggcgcgtactcgctg
atgcaggagcagctggcgtacccgcagcaccacggcatgggcgcgccgcagctgcaggcg
cccatgcaccgctacgacgtgacgggcctgcagtaccccatgatgtcgtcggcgcagacg
tacatgagcgcggcgcccacgtacagcggcgtggcgcccgcgtacgcgcagcagagcgcg
ggcgccgtgggcctgggcagcgtgggctccgcgtgcaagacagaacccagctcaccgccg
cccgccgtcgcgtcgcactcgcagcgcgcgtgcctcggcgacctgagggacatgataagc
atgtacctgccgcccgggggggacagcgccgagcacgcgggcctgcagggcagccgtctg
cacagcgtgcacccgcactaccagagcgcgggcacgggcgtgaacgggacactaccgctg
acccacatctga
DBGET
integrated database retrieval system
