KEGG   Colossoma macropomum (tambaqui): 118806488
Entry
118806488         CDS       T09004                                 
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    118806488 (pcdh20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cmao01009]
    118806488 (pcdh20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cmao04515]
    118806488 (pcdh20)
Protein phosphatases and associated proteins [BR:cmao01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118806488 (pcdh20)
Cell adhesion molecules [BR:cmao04515]
 Cadherins
  Protocadherins
   118806488 (pcdh20)
SSDB
Motif
Pfam: Cadherin Cadherin_FAT4_N Cadherin_2
Other DBs
NCBI-GeneID: 118806488
NCBI-ProteinID: XP_036423812
LinkDB
Position
Unknown
AA seq 836 aa
MNVACLFQRVLLVASVRQIICHTLPFLTPEEQVEGIKIGTLSGVYSPPYQLLGRGYLRVN
EETGDLYTTEQKIDRESLCPSQEERDCTISDDALVGPDQEMLKIIVVVEDINDNAPYFET
DEIYLRIPEDAAVGMRVLLDNEAWDEDTGSNGEMSYHLEGAGGFFSVAQDGSALELVVEK
ELDREAQDEHRMVLVAVDGGSVPLSATASLVITVLDVNDHCPEFSPDSPHTAVVSGGAAQ
GTTVKQVQATDRDLGHNAQITYSFSPQISERAKALFRLDRVTGRISLAVDVRLDTLEEHV
LKIVANSPHCPPVLTQVTVSMQPVVSREPDIEIKFMAEYKNQTIVLRENEPPTVLALVEL
RDTSSVQAVLSLEADSIPFTLKEQAGNYLLSTSKPLDFELCSDYRVTVVISEAQGKRVHG
RQVIKVAVEDVNDNAPQFEQPHYQAEIEENNKPGVSLIQVRASDADSQLYGKVSYRLIQN
PPVFSIDEATGVLSVSESLDREQQGTYVLTVLARDLGSPSLEAMVSVSVNVLDQNDNQPA
FLKQHFVFFISESIPRLAQVGKIEVRDADEGDNGKVVDVRVLDKHVPFAVDLSQLTLRCT
AEVDREKRDRYDLLLLAVDGGSPPRSSTASVTIFVEDVNDNQPQVILPSSNLSCLTVSPS
TRTGSIVTKIYAVDRDSGMNSDITYQITARQPAWPSPFQIDPHSGNITLANRLAGGAYGM
HHLFIVVRDGGKPVPLQATVWVNLLVNETLEQCHLTSVPPYPSQTTEPPVLSQLESLNKP
AQSCTEPPWLVLLCGLGMMVFSACMLLAATVIFVRHKNLTRKLTSRREPLEMNLLK
NT seq 2511 nt   +upstreamnt  +downstreamnt
atgaacgtggcgtgtctgtttcagagggtgcttctcgtggcatctgtcaggcagatcata
tgccacacgctgcctttcttgacaccggaggagcaggtggaaggaattaagataggcact
ctgagtggcgtttactcccctccataccagctgcttggtagaggttatttgagagtgaac
gaagaaacgggggacttgtacacgacagagcagaaaatcgaccgggagagcctgtgtccg
tcacaggaggaaagggactgtactatttcagatgatgccctcgtaggccctgatcaggag
atgctgaagataatcgttgtcgtggaggacattaacgacaacgctccttattttgaaact
gatgaaatttacttaagaattcccgaggatgcggctgtcgggatgagggtcctgttagac
aatgaagcttgggacgaggacacaggcagcaatggagagatgagctaccatttagaagga
gctgggggcttcttcagtgtggcccaagacgggtctgccctcgagcttgttgtggaaaaa
gagctggaccgagaggctcaggatgagcaccggatggttcttgttgccgtggacggcggc
tctgtgcctctgagcgctacggcatctctcgtcatcacggtgctggacgttaatgatcat
tgcccagagttcagccctgatagtcctcacacagctgtggtgtcaggaggagcagctcag
ggcacaactgtaaagcaggttcaggccacagatcgtgatctgggccacaacgctcagatc
acatactccttcagccctcaaatttcagagcgggccaaggccctcttccgcctggaccga
gtcacaggcaggatcagcttagctgtggatgtgaggttagacacgctggaggaacatgtg
ttgaaaattgttgcaaatagcccacattgcccgcctgtgttaacacaggtaactgtatcc
atgcagccggtggtgagccgggagccggacatcgagatcaaattcatggcagagtataaa
aaccaaacaatagtgttacgagagaacgagccccccactgttttggctcttgtggagctg
agagacacctcaagcgttcaagcagttctgtccttagaggcagacagcataccattcact
ttgaaagagcaagcaggcaactatttgctttcaacatcaaagccactagactttgaactg
tgcagtgactatcgcgttactgtcgttataagcgaagcccaaggcaaacgcgtgcatgga
agacaagtgatcaaagtggcggttgaagatgtgaatgataatgccccacagttcgagcag
cctcactatcaagcggagatagaagagaacaataaacctggcgtgtctttaatacaagtc
agggcatctgatgcagacagccagctctacggaaaagtgtcataccggctgatccagaat
cctcctgtcttcagtattgatgaagcaacaggtgtgctgtctgtatcagagtctttggac
agagagcaacagggcacgtatgtcctcacagtgctggccagggatctgggctccccttct
ctagaggccatggtgtctgtgtctgtaaatgtgctggaccagaacgacaatcagcctgcc
tttctcaagcaacacttcgtcttcttcatctctgagagcattccaaggctagctcaggtt
gggaagatcgaagtgagggatgcagatgagggagacaatgggaaagtcgtggatgtgcgg
gtgctggacaagcatgttcccttcgctgtggacctgtcccagttgacgctgcgctgcact
gctgaagtggaccgggagaagcgggaccgctatgatctactcttgctggctgtggacggt
ggcagccctccacgctcctccaccgcttcggtgaccatttttgtggaggatgtcaatgac
aaccaacctcaggtgatcctgcctagcagcaacctctcttgcctgaccgtatcccccagt
accaggacgggcagtattgtaaccaagatctacgctgttgaccgtgactcaggcatgaac
tcagacatcacctaccagatcacagccaggcagccagcctggccaagcccgttccagatc
gaccctcattctgggaacatcacgctagcaaatcggctagcagggggcgcttatggcatg
caccacctcttcattgtagtgagggatggggggaagccagtgccccttcaggccacagtg
tgggtcaatctgctggtcaatgagacactagagcagtgccacctcaccagcgttcctcca
tatccatcccaaaccacagaaccccctgtgctttcgcagctggaatccctcaacaagcca
gcgcagtcttgtaccgaaccaccttggctcgtactgctctgtggtctgggtatgatggtg
ttctcggcttgcatgcttctagctgccactgtgatttttgtgagacataaaaacttgaca
cgaaaactgacaagcaggagagagccccttgaaatgaatctcttaaaataa

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