Colossoma macropomum (tambaqui): 118806540
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Entry
118806540 CDS
T09004
Symbol
det1
Name
(RefSeq) LOW QUALITY PROTEIN: DET1 homolog
KO
K10571
de-etiolated-1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118806540 (det1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118806540 (det1)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118806540 (det1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
118806540
NCBI-ProteinID:
XP_036423862
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MASCSAPTTEDSFPTLRPRRIQNQNVVHRLERRRICSGRPGAHWYRVRCFHQNLFPNFTV
VNVEKPPCFLRKFSPDGRCFIAFSSDQTSLEIYEYQGCQAAEDLLQGQEGETLANGNDQR
SLNIRGRLFERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAAYLPEEPHPHFFE
VYRNNESVTPNPRSPLEDYSLHIIDLHTGRLCDTRTFKCDKIILSHNQGLYLYRNILAVL
SVQQQTIHVFQVTPEGTFLDVRTIGRFCYEDDLLTLSAVYSEAQAEGQPGFSRLYKEKSI
NSLKHRLLVYLWRRAEQDGSATAKRRFFQFFDQLRQLRMWKMQLLDEHHLFIKYTSEDVV
TLRVTDPSQPSFFVVYNMVTTEVIAVFENTSDKLLELFENFCDLFRNATLHSEAVQFPCS
ASSNNFARQVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDK
WVSVMERPKTCGDHPIRFYARDSGLLKFKIQAGLLGRPINHTVRRLVAFTFHPFEPFAIS
VQRTNAEYVVNFHMRHGCV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgcagcgcgcccacaacggaagacagtttcccgacgttgcgaccacgacgc
atccagaaccagaacgtggtccatcgtctggagcgccggcgcatctgctcgggccgccct
ggggcacactggtacagggtgcgctgcttccaccagaatctcttccccaactttactgtg
gtgaacgtggagaagcccccatgctttttgcgcaagttctctccagatggacgctgcttc
atcgcgttctcctcggaccagacctccctggagatatacgagtaccagggatgccaggct
gccgaggacctgctccagggccaggaaggagagactttggccaacgggaatgaccagcgc
tctctgaacatccgcgggcggctcttcgagcgcttcttctctctcctccacgtcaccaac
gtggcctctaacggggagcacctgaaccgtgagtgcagcctgttcacggacgactgccgc
tacgttatagtggggtctgcggcctacctgcccgaggagccgcacccgcacttcttcgag
gtttaccgcaacaacgagtccgtgactccaaacccgcggtctcctctggaggattactcg
ctccacatcatagacctgcacacgggccgtctgtgcgacacacgcaccttcaaatgtgat
aagatcatcctgtctcacaaccagggcctctacctgtacaggaacatactagccgtgctg
tctgtccagcaacagaccatccatgtgtttcaggtgactccagaaggaactttcctggac
gtccgaaccattggacgtttttgctacgaggatgaccttttgaccctttcggcggtgtac
tccgaggctcaggcggagggtcagccgggtttctctcgactctacaaggagaaaagcatc
aactctctgaaacacagactcctggtgtacctgtggaggcgagcggagcaggacggcagc
gccacggccaaacgcaggttcttccagttcttcgaccagctgaggcagctgagaatgtgg
aagatgcagcttctggacgagcatcacctcttcatcaaatacaccagcgaagacgtggtc
accctccgggtcaccgacccctctcagccctctttctttgtcgtgtacaacatggtcacc
actgaggtgatcgcggtgtttgagaacacttcggacaagctgttggagctgtttgagaat
ttctgcgatcttttccggaacgctacgctccatagcgaggccgtgcagttcccctgctcc
gcgtccagcaataacttcgcccggcaggtccagcgcaggtttaaggacactatagtgaat
gctaagtatggtggtcacacagaggcggtccgcaggctgctgggtcagctccccattagt
gcgcagtcatacagcagtagcccctacttggatctctcactcttcagctacgatgacaag
tgggtctctgtcatggaaagacccaaaacatgtggagatcatcccatacggttttatgca
agggattctggtttgctgaagtttaaaattcaggctggcctgctgggcagaccgattaac
cacaccgtccggagactggtcgcctttacctttcaccctttcgagccttttgccatttct
gtacagcgcacgaacgctgagtatgttgtcaacttccatatgcgccacgggtgtgtgtga
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