Colossoma macropomum (tambaqui): 118806819
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Entry
118806819 CDS
T09004
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118806819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118806819
Membrane trafficking [BR:
cmao04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118806819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
MIC19_MIC25
DUF4635
Motif
Other DBs
NCBI-GeneID:
118806819
NCBI-ProteinID:
XP_036424331
LinkDB
All DBs
Position
Unknown
AA seq
1469 aa
AA seq
DB search
MPLISLDDDDPRWVPTHVNVTVLRARGLRTKGKQGSRYVYTVIQVGKDKYTTGLVEKAVE
PEWNEECSFELLPGLLEDPAGPVGAYPPGSSDLVLTVMHRVLIGLDVFLGQAVVPLDKAF
REGVCPRNEWLKLRSKAGRKEKERGELQVTVQFTRNNMTASMYDLTVRDKPRSTFGKLKD
RVTGKKRGDVESSSAILPGRYAALSSSAGQSLQENGSGGSPGMEECGDERRSKVKDFFLK
GKLRKNSDTRSCSSLASESSMASSAGDPFVPIELCSTPIYSSKVMEPFCADSEGGVKVMT
HKRAYSDEASKVTASRPCPAVENLQGQNTLLSKSTLCINGSHIYSSEPACSKGPGGLPVK
RSLLEKCSPLSRSLQNLTRRSEDPQKAEGRRWSIDKSKKEGEKESEGSVAQDQGATTSEG
KPVLATAPLVVAAGGTEGTDKGKKLRKTLFSSGRSDSLPAKPEQAAAPQEKRLRGWFGSG
DAQNKPRLGVTPKVESSSDPSSPLPPCFPSSPPGSLPLDSSTGYVSPPSVSHHTNPFTHP
SPPTTSISSSNPFLTRLQRNPFFEELIAEEALKSPTEMSCYPNFPHDHNPAFLARSGLSS
PASDGTPSRIASIKRERPRSVARQRSLPALMPGTQEAVTVNANNSNTNSDRPLSETGGEL
DDFEAFATSRLKSPVGTPTRPPSVPISSSSHHSPMEHHAFQPNNGIVVDQANQGIPRSWD
LPPLPPRKPTGIPFPVRQRCLESWLDRGQELAVQKEASVLFQTDLASLQHVRETNGQVSP
LNKESFMFFHCAALEQNINAYPLTHTPQMPTNGNLNLLEVGDGRVLAERGLSPNLTGSHG
SDPIQISPVFGLPENVIVNTSQNCMYRDVQETSLYTENDHTVQNTTNCLSDWDTTVSESL
CSSFQTLPKPPESSCELNSKPKPVSNPPNENITANGDVTAQTLPARDSNNNTNDTSQFAF
IDSDNSLTDGTFDNNKGNNKGNITLTQHKDASAYDPSGKVLLICRSSPGISEDLIEKMTT
ELEMFSPKKTSETDDVHKDITSQQAPVAAGASNNNHLKALFFEGPCDSLEGHDSTMTQPR
ERVSDLKDVSSVVLSKQPTLQSNPRAESEGSGYKDSFVAPLTASILNSDDGNTTTQLKPE
AVEDNAGLDAACKGVGSLTYDELKTENAELEAQEKNREVPVLEIGKSCFNHTNSISFEEL
HAQVAPRGCRSPSKTKTEVRSARLRTSTANSSKADSSTFPSTASADIKSATTLHDSASTF
LCLSDPNTVPNSVPDLDSDLTSLTYTPTLRPGLGSPLAAAPSTTSTAQPQVAARHTLSPE
EAQPASSPPPPEESSPHPVKPLTNTAAQGEKKSEGRSVLEKLRSSIHSGRSSQQSTAEPE
KAQVYMSEARAHYQTLTNMELIALLLQQEIDAERQREESELQATLLEKRESELKKLKVQV
RDLEDYIDKLLVRIMEQTPTLLQVRARPK
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgatcagcctggacgacgacgacccgcggtgggttcccacgcacgtgaacgtg
accgtgcttcgcgcgcggggtctgcggaccaagggcaagcaaggcagccggtatgtgtac
acggtcatccaggtgggcaaggacaagtacaccacgggcctggtggagaaggccgtcgag
cccgaatggaatgaggaatgcagtttcgagctgctgcccgggctgctggaggatccggcg
ggtccggtgggcgcctacccgcccgggagcagcgacctggtcctgaccgtcatgcaccgg
gtcctcatcggactggacgtgtttctgggccaggccgtggtcccacttgacaaagctttt
cgggaaggagtttgtcccagaaacgagtggctgaagctgcgctccaaagcagggagaaaa
gagaaggagcgcggagaactgcaggtcaccgtccagttcactcgcaacaatatgactgcc
agcatgtacgatctgaccgtcagggacaagcctcgctcgaccttcggcaagctgaaggac
cgcgtcaccggcaagaagagaggagatgtggagtcctcctcagccattctgcctggccgc
tacgcagccctgtccagttcagctggtcagtctctgcaggagaatggcagtggggggagc
cctgggatggaggagtgcggagatgaacggcggagcaaggtgaaggatttcttcctgaag
ggaaagctgcggaagaactcagacacgcgctcctgttcatctctggcctcggagagcagc
atggcgtcctcagctggggatccgttcgttcccatagagctgtgcagcacacccatctac
agcagcaaagtcatggagcccttctgcgctgattcagagggaggagtaaaagtgatgacc
cacaagcgtgcatacagtgatgaggccagtaaagtcactgcctcgcggccctgtccggct
gtggagaatctgcaaggccagaacacgctgctctctaagtccaccctctgcatcaatggc
agccacatctactcttctgagcccgcctgttccaaaggccctggcggcctgccagtcaag
cgcagccttctggagaaatgctctccactctcacgatcgctgcagaacctcacccgccgc
agtgaggacccccagaaggccgaggggaggcgctggtccatcgacaagagcaagaaggag
ggtgagaaagagtctgagggctctgtggcccaagatcaaggagccactacatcagaggga
aaaccagtcctagccactgccccactagtggtggctgctggtggtacagagggtacagat
aaggggaagaagctgaggaagactcttttctccagtgggaggagtgactctctcccagca
aagcctgagcaggctgctgcccctcaggagaaacgtttgcgtggttggttcggctccggc
gatgcccagaacaagccaaggctgggagtcactcctaaagtagaaagcagctcagaccca
tcctcccccctccctccctgcttccccagctcaccaccaggctctctcccccttgattct
tctactggctatgtgtcgccccctagtgtcagccatcacactaacccattcacccacccc
tcacctccgaccacctccatctcctcctccaaccctttcctcacacgactgcagaggaac
cccttttttgaggagctcatagccgaggaggctttgaaatctcctactgaaatgtcctgc
tatcctaactttccccacgaccataatccagcattcttggccaggtctggcctctcaagc
cctgccagtgatggcacaccaagcagaatagcatccataaagagagagaggcctcggagt
gtagccaggcagaggtccctccctgccttaatgcctggaacacaagaggcagtcactgtg
aatgctaataacagtaacactaattcagaccgccctttatcagagactggaggggaattg
gacgattttgaggcctttgccactagccgtctaaaatcaccagtggggactcctactaga
ccaccctcagtcccaatctcatcctcaagccatcatagcccaatggagcaccatgctttt
caaccaaataatggtattgtagttgaccaagccaaccagggaatccccaggagttgggac
ttgcctcctttacctccgaggaagcccacaggaatcccatttcctgtgcgacagaggtgc
ttagagagctggctagaccgaggtcaagagctagctgtccaaaaagaggcaagtgtgcta
ttccagacagacttagcctcgctacagcatgttagagagacaaatggccaagtctcccct
ttaaataaagagtcatttatgttcttccactgtgctgctctggagcagaatattaatgcg
tatccactgacacatactcctcaaatgccaacaaatggaaatctcaaccttttagaggta
ggagatgggagagttttggctgagagagggctcagtccgaatctgacaggaagccatggt
agtgatcctattcagatcagccctgtgtttggccttcctgagaatgtcatagtaaacaca
agtcaaaactgcatgtatagagatgtacaggaaacctccctgtatactgagaatgatcac
actgtgcagaacacgacaaattgcctctcagactgggacacaactgtgagtgagtcactg
tgcagttcatttcagactctaccaaagcctcctgagtcctcctgtgaattgaactcaaaa
ccaaagccagtttctaatccaccaaatgagaacatcaccgccaatggagacgtcactgcg
cagacactccctgctcgagactccaataataatacgaatgatacttcacagtttgctttc
attgactctgacaactcgcttacagatggcacttttgacaacaacaaaggcaacaacaaa
ggcaacataacattaacacagcacaaggatgcttcagcctatgacccctctggaaaagtg
ctcttaatttgcaggtcttccccaggaatctctgaagatttgatagaaaaaatgactaca
gaactcgagatgttttccccaaagaagacttcagagactgatgatgttcataaagatatt
acatcacaacaggcccctgttgcagctggtgcatccaacaataaccatttgaaagctttg
ttttttgaaggaccttgtgacagcttagaaggacatgactccaccatgacccaacccaga
gagcgtgtgagtgatttaaaagatgtttcttcagtggttctttctaaacagcctactttg
cagtcaaatccaagagctgaatcagagggctctggttacaaagacagctttgtggctcca
ctaactgcctctatcctcaacagcgatgacggcaacacaacgacacagctcaaacctgag
gcagtggaggacaatgcaggcttagatgctgcatgcaagggtgtaggcagtctgacttat
gatgagcttaagactgagaacgctgaactcgaggcgcaggaaaagaaccgtgaggttcct
gttttggagatcgggaagtcatgtttcaatcacacaaatagcatcagttttgaggagtta
catgcccaagtagcaccaagaggctgtagaagtccctccaaaaccaaaactgaagtaaga
tctgcacgcctcagaacgtctactgcaaactcgtccaaagctgactccagtacattccca
tccacagctagtgctgacataaaatcagccacaactttgcatgattctgcttctacattc
ctgtgtctatctgaccccaacaccgttcctaactctgttcctgaccttgactctgacttg
acctccctcacgtataccccaaccttgaggcccggcttgggaagccctctggccgcggcc
ccctccaccacctccacagctcaaccccaggtcgctgcacggcacacactttcccccgag
gaggcacagccagctagcagcccccctccccctgaggagagcagtcctcacccagtgaag
cccctgaccaacacagcagcacagggagagaagaaatcagaggggcgctcagtgctggag
aaactgcgctcctccatccactcaggacgctccagtcagcagagcacagctgagccagag
aaagcacaggtgtatatgtccgaggctcgtgctcattaccagacgctgaccaacatggag
ctgatcgctctgctgctgcagcaggagattgacgcagagcgacagcgggaggagtcagag
ctgcaggctacgctgctggagaagcgcgaatccgagctgaagaagctgaaggtccaggtt
cgggatctggaggactatatcgataagctgctagtgcgcatcatggagcaaactcccacc
ctgctgcaggtacgcgcccggcccaagtga
DBGET
integrated database retrieval system
