Colossoma macropomum (tambaqui): 118806887
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Entry
118806887 CDS
T09004
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118806887 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmao01009
]
118806887 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmao04515
]
118806887 (pcdh11)
Protein phosphatases and associated proteins [BR:
cmao01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118806887 (pcdh11)
Cell adhesion molecules [BR:
cmao04515
]
Cadherins
Protocadherins
118806887 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
RibLong
DUF6249
TMEM154
Prominin
DUF4863
AP3D1
Motif
Other DBs
NCBI-GeneID:
118806887
NCBI-ProteinID:
XP_036424443
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MDVASEAHVLVLFLTCLVSLCWAQEKDYTVKEEQPENVRIGNLRKDLDLNLDPNIKLSSA
LQFKPVYKTGDVPLVRVEASTGEIFTTANRIDREKLCSGVFNEKRCFYEIEVAVLPDEIF
RLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVS
DVNDNRPVFKDSEVEVNVPENAPMGTSVTQLHATDADLGTNAQIHFSFSNQISPATKRHF
AIDSSTGLITVKQPLDRETNPVHKLIVHASDGSTTPSRATVIVNVTDVNDNVPSIDTRYI
MNPINGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENND
PGTQLIKISATDADSGSNALIIYSLGPDAPDGFSIDSRSGILSVSKRLDREKQEKYSFTV
IARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAVVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDGGLAQTTSYAKVT
INVVDVNDNRPVFVIPPSNYSYDLVPFTTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSS
RGLFAIDKTTGNITLQEKIANADQGLHRLVVKVKDLGQPESLHAIALVHLFVNDTVSNAT
FIQEQVRKSMETPLDRNVEDNDVIPQTSGYVIVVIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKGKQSGEWVSPNQEGRQIKKKKKKKKRSPKNLLLNFVTIEESKSEDPTHEHING
TLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVAPKKHHV
IQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGSFKPAGQIHTRQETALKPPLYGT
LCGTGTARSHRIKINL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcgagcgaggcccatgttctggtgcttttcctcacctgcctggtgtcactg
tgctgggcccaggagaaggactacacggtgaaagaggaacagcccgagaatgtgcgcatt
ggaaatctgcgcaaagacctggacctgaacctggaccccaacattaagctgtcctcagcc
ctgcagttcaaaccggtctataagacaggcgatgtgcctttggtgagggtggaggccagc
acaggggaaatcttcaccactgctaatcggatcgaccgggagaagctttgttctggagtc
ttcaacgagaagcgctgcttctacgagatagaggtggccgtgctgccagatgagattttt
cgactggtcaagatccgcttcctcatcgaagacatcaatgacaatgcacccctgttccag
tctactgtcatcaacatatctattcctgagaatacagcaatcaacaaccggtatccagtc
ccctctgcctttgaccctgacgtagggatcaatgggatccagcactatgaactcgtcaag
agtgtgagtgagttcggcctggacatcatcgaaactccagagggagacaagtggccccaa
cttatagtccagcagaacctggatcgagaaacgaaggacacctttgtgatgaaaatcaaa
gtggaagatggtggcaaccctccaaagtccagcacagccattctccaggtcactgtctca
gatgtgaacgacaatcgtccggtgttcaaggacagtgaagtggaggtgaacgtgcctgag
aatgccccaatggggacatcagtcacacaacttcatgccaccgatgctgatctgggcacc
aacgcccagatccacttttccttcagcaaccaaatctccccagctaccaaacgacacttt
gctatcgacagctcaactggattgattaccgtcaagcaaccactggacagagaaaccaac
ccagtccacaagcttattgtccatgccagtgatggcagcaccaccccttcaagggctacc
gtgatagtaaatgtaacagatgttaacgacaatgttccgtctatagacactcggtatata
atgaaccccattaatggcactgtattgttatctgaaaatgcccctctaaacacaaaaata
gctctaattactgtgactgacagagatgctgaccttaatggtaaagtgacatgttacact
gatcatgacgtaccctttcggttgaagccagtttttaacgaccagttcttgctggaaact
gcagcacccttagattatgagactactcgagagtatgcaattaagatagttgcttcggat
tcagggaagcctcctttgaacacttccgcaatggtcctcattaaaatcaaggatgagaat
gataatgccccagttttccctcagccagagattcagctgtccatcccagagaacaatgac
cctggcacacagctgataaagatcagtgccacagatgcagacagtggttctaatgccctt
attatttattcccttggcccagatgcacctgatggctttagcatagactctcgatctggt
atactctctgttagcaagcggctggatagagaaaaacaagaaaagtattccttcacagtc
attgccagggataatggttctaaccctctgcagagcaatgtcaccgtgaagctaattgtc
caagaccaaaatgacaacagtccagccttcacccatcctgaatacaatttctatgtgcct
gagaacttgcctctgtacggcacagttggtttgatcacagttactgatgcagatgccggc
gataacgctgtggtcactctctcaatcataaatgggaaggacaattttattatcgacccc
aaaactggtgtgatcaaaccaaatattacgtttgacagggagcagcaaagttcctacacc
tttgtagtcaaggccgtggatggaggactggctcagacaacttcatatgccaaggttact
ataaatgttgttgatgtcaatgacaatcggccggtgtttgtcatccccccctccaattac
tcctatgacctcgtccctttcacaaccagccccggctctgtggtgaccagagtgtttgcc
attgacaacgacactggcatgaatgcagagctgcagtacagcatcattggagggtcatca
agaggactgtttgctattgacaaaactacaggaaacattaccctgcaggagaagattgcg
aatgctgatcagggcctccataggttggtggtgaaggtcaaagacttaggccagccagaa
tccctgcatgcaattgccctggttcacttgtttgtgaatgatactgtatccaatgccaca
ttcattcaggagcaagtgcgcaaaagcatggaaactcctttggacagaaatgttgaagac
aatgatgtcatccctcagaccagtggctatgtgattgttgtcatagccataattgctggg
actatgactgtcatattggttatttttgtgactgctttggtacgttgtcgacagacgccc
agacacaaagttgttcaaaagggcaagcagagtggcgagtgggtgtcaccaaaccaggag
ggccgtcagatcaaaaagaagaagaagaaaaagaagaggtcccccaagaacctgctgttg
aactttgtgactattgaagaatccaagtctgaagaccctactcatgagcacatcaatggc
accttggacctcccagttgagcttgaggagcagacaatggggaagtataactgggccacc
acgccaacaacctttaaacctgacagccctgacttagccaagcattacaagtcggcctct
ccccagcctacctttcagatcaaaccagagaccccagtggctcctaagaagcaccatgtg
attcaggagctccccttggacaacacgttcgtagttggctgtgactcactctccaaatgc
tcctccagcagctccgacccgtacagcgtctcagagtgcagctgtcaagggagcttcaag
ccagccgggcaaatccacacccgacaggagacggcactgaaaccaccactctatggcaca
ctctgtggcacaggtacagctcgctcccacaggataaaaatcaatctctag
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