Colossoma macropomum (tambaqui): 118807060
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Entry
118807060 CDS
T09004
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118807060 (rnf20)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118807060 (rnf20)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
118807060 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
SOGA
CCDC138_cc
Motif
Other DBs
NCBI-GeneID:
118807060
NCBI-ProteinID:
XP_036424744
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MSAQKRPSESGGSGPAEKRRERDGGEEGEGQSTGAAASTAVETVIKLGGIANSEEQDIKA
LQVKNRKLGEALDQRQVIEDELRERVERLETRQATDDASLLILNRYWNQLDENMQLMARR
YDQSGSEPVDSQPAEGRSLKPGTPEPDGDSNQERAKDRGQQGEGASSFLAILASSSSEEM
EAELQERVESSRKQASRVVEIYESLKSTVDQLKKDLESGTDGNTALWEAAARLNTLLANE
NEHLRQLTDDLMQKYTHMTNESRSLGRAATRADNRISELQVLIEELQWDTEKVRRRENRL
NTHLGEVLERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELAENRLSELQKL
QQDLQTVVQENNNMKMELLCRAEGLVRETAEYRCLQSQFSVLYNESLVLKAQLDETRARL
NTTRAARLRQLDHMENDEVSLQRKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQA
GPINREMRHLISTLQTHNQQMKGEVVKYKLRLREAQQELNQLRAAKGNPAVQSQSSTEMD
IKEETASPLPPATSGNVIVKAEPDNGSATPTGTAVSVKTEPGTEPEVTVKEEEKEKEKEK
EEKKEKEQKERERAPRGSGASGAVKEEKEKPGTSCSQSEDSPAERCTVIGGPKRKEVEQL
KIVRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKAKAEAEELRQRLRDLEE
RERREGKKMADEEALRKIRSVEEQIDILNKKLSLAKQEEDALLSEMDVTGQAFEDMQEQN
IRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQVVRKLE
EKERLLQGTISAAERELALRTQALDMNKRKAQESALLSEEVRSQLEAVQQRLTAVREEVI
ENSISREKESFNARRAQEDISKLRRKIEKAKKPAENIRNGDEILNQEIIEYKARLTCPCC
NSRMKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcagaagcgccccagtgagtctgggggttcaggccctgcggagaagcgccgt
gagagggatggaggagaagagggagaggggcagagcaccggggcagccgccagcactgct
gtggagactgtcatcaaactgggaggcatcgctaactcggaagagcaggatattaaagca
ctgcaggtgaaaaacagaaagctaggagaggccctggaccaaagacaggttattgaggat
gagttgagagaaagagtggaaaggcttgagactcgccaggctacagatgatgctagtcta
cttatcctcaacagatactggaaccagctcgatgagaatatgcagttgatggctcgccgt
tatgaccaatcagggagtgagcctgtcgacagccagcctgcggaggggcgcagcctgaag
cctggaacaccagagccagatggagattccaatcaggagagagcgaaggaccgaggtcaa
cagggggaaggggcaagctcattccttgccattttggccagtagcagcagtgaagaaatg
gaagcagagctgcaggagagggtggagtccagtcgtaagcaagccagtcgtgtggtggaa
atttacgagagcttgaagagcactgtagatcaactgaagaaggacttggagtctggaaca
gatggaaacacggctctctgggaagctgctgcccgcctcaacactctgctggctaatgaa
aatgaacatcttcgtcagctgactgatgacctcatgcaaaaatatactcacatgaccaac
gagtctcgttccctgggccgtgccgctactcgtgccgataacagaatcagtgagctgcag
gtgctgatagaggagcttcagtgggacacagaaaaggtccgccgacgggaaaaccgtctc
aacacacacctgggagaggtgctggagagggtaaacagtaaaggctataaagtgtgtggc
gaagctagcagtgtgtgtgggaccatcactattaacaagagaaagtttgaggagatgaac
agcgagctggaggagaacagggagctagcggagaaccgactcagtgagctgcagaaactg
cagcaggacctccagacagttgtccaggagaacaataacatgaagatggagctcctgtgc
agggctgagggacttgtgagggaaacagcggaatatcgatgtttgcagtcacagttctcc
gtactttataatgaatctttggtgctgaaggcccagctagacgagaccagagctcgcctc
aacaccaccagagcagcccgcctccgccagcttgaccacatggagaatgatgaggtgtcg
ctgcagcgtaaggttcgtactgaggtcattcaactggaagacacactggctcaggtgcgg
aaagagtacgagatgctgaggatcgagtttgagcaaacactcgccgccaatgagcaagca
ggtccaataaatcgggagatgcgtcaccttatcagcacgctgcagacccacaaccagcag
atgaagggcgaggtggtcaaatacaaactcagattaagagaggcccagcaagaactcaac
cagctccgtgctgcgaagggcaaccctgctgtccagtcacagtcgagcacggagatggat
ataaaagaagagactgcctcccctttaccacctgccacctctggtaatgtcatagtgaaa
gcagagccagataatggttcggccacgcccacaggtactgcagtctcagtgaagacagaa
cctggaactgaaccagaagtaacagtgaaagaagaggagaaagagaaggagaaggaaaag
gaggagaagaaagaaaaagaacagaaagaaagagagagggcacctcgtgggagtggtgcg
agtggagcagtcaaagaggagaaggagaagccaggcactagctgtagtcagtcagaagac
tctccagctgaacgctgcacagtcattggaggacccaagcggaaggaagtggagcaactg
aagattgtcagggcggagctgaagaaagcccaggagtctcagagggagatgaagctcttg
ctggacatgtatcgctctgcgccaaaagagcagagggacaaagtgcaactcatggctgcg
gagaaaaaggccaaggctgaggcagaggagctgcgccagcgattgcgagatttggaggag
agagaaaggagggaagggaagaagatggcggatgaggaggctctgaggaagatccgctca
gtagaggaacagattgacatcctcaacaagaagctctccctcgccaagcaggaggaggac
gccctgctgagtgaaatggacgtcaccgggcaggcctttgaggacatgcaggagcagaac
attcgcctgatgcagcagctcagagagaaggatgatgccaacttcaagctgatgagcgaa
cgcatcaaatccaaccagattcataagctactgaaagaagagaaagaggaactggcggac
caacttctcacgctcaaaacccaggtggatgctcagcttcaggttgtgaggaagctggag
gagaaagagcgcctcctgcagggcacgataagtgctgcagagagagagctggccctgcgc
acgcaggcccttgacatgaacaaacgcaaggcacaggagtctgctttgctgtcggaagag
gtacggtctcagctggaggcagtgcaacagaggctcactgcagtcagagaagaggtcatc
gaaaacagcatctccagagaaaaagagtccttcaatgcccgtcgtgcacaggaggacatc
tccaaactgcgccggaaaatcgagaaggccaagaaacctgctgagaacattcgcaatgga
gatgaaatacttaatcaggaaataattgaatacaaggctcgtttgacgtgtccatgctgc
aactcgcgcatgaaggacgccgtattaacgaagtgcttccacgtcttctgcttcgaatgt
gtgaagacgcgctacgacactcgccagaggaaatgtcccaagtgcaacgcggccttcggc
gccaacgacttccaccgaatctacatcggataa
DBGET
integrated database retrieval system
