Colossoma macropomum (tambaqui): 118807122
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Entry
118807122 CDS
T09004
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118807122 (lsm11)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
118807122 (lsm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
118807122
NCBI-ProteinID:
XP_036424859
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MEESEREGGSESSSAVCGQSAALNASEQQVSEQDRGENTEADEDDIDKKLDISSELFDPL
LALYSPQVPLPYPNIRCFNNVAEYESFIKGGRGRAKPENVEKKLRKSRRGVADPERIERL
KKLMVNNPVEEGEETGAKQSRRKQKARKNVLTRMPLHDGSPLGELNRCVQERIRIKVHIR
SFKGLRGVCTGFVVAFDKFWNLAMVDVDETYREPLLGEAFYHEKALTVTRLFQKLQVQEG
QELSTGQKNSGKTAAANTSTPADQSSEPHYTTRSSIRSSRGQRQPLCGKGPADSGPDAGS
EQRPKVPKPKVEYGRMRTRHVNQLFIRGENVLLVNVQQE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagtgagagggaaggtgggagtgaaagcagttcggctgtttgtggtcaaagt
gcagcgttaaacgcaagtgaacagcaagtctcggagcaggaccgcggcgaaaacacagag
gctgacgaagatgatatcgataagaaactggacatcagttcggagctctttgatccactg
cttgccttgtactccccccaagttccgctgccctaccccaacatcaggtgctttaacaac
gtcgctgagtacgagagctttattaaaggaggtcgtggccgagcaaaacctgaaaatgtg
gagaaaaagcttcgcaaatcgcggaggggtgtagcagatccagagagaatagaaaggctg
aaaaaactcatggtgaacaacccagtagaggagggagaggagactggcgcgaaacaaagt
cgaagaaagcagaaagctcgtaaaaatgttcttacgaggatgcccctgcatgacggcagt
cctttaggagagctgaaccgctgcgtccaggagagaatcagaatcaaggtccacattcgg
tccttcaagggtcttcgtggggtctgcactggctttgtggtggcctttgacaagttctgg
aacttggcaatggtggatgttgatgaaacatacagggagcccttacttggagaggctttt
tatcatgagaaggcactgaccgttacaaggctctttcaaaagttacaagtacaagagggc
caggagctcagcactggacagaaaaactctggaaaaacagcagcagctaacacctcaaca
ccagctgaccagagcagcgagcctcactacaccaccagaagcagcatcagaagcagtcga
ggccaaagacagccgctgtgtgggaagggcccagcagatagtggacctgacgctggctca
gagcagagacccaaagttcccaagccaaaagtggagtatggaagaatgcggacacgtcat
gtcaatcagctttttatccggggagaaaatgtcctccttgtgaacgttcagcaagagtaa
DBGET
integrated database retrieval system
