Colossoma macropomum (tambaqui): 118807275
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Entry
118807275 CDS
T09004
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmao04515
]
118807275 (pcdh10b)
Cell adhesion molecules [BR:
cmao04515
]
Cadherins
Protocadherins
118807275 (pcdh10b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
118807275
NCBI-ProteinID:
XP_036425132
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MFVPALSFVLLALVRGASSQLRYSVAEESELGTFVGNIAEDLGLDATKLSARRFQTVPSS
RTPYLDVNLETGALYVSEKIDRERVCGGSPPPCLLHLEVFLEDPLELFRVETEVLDINDN
PPTFPEPDVTVEISESASAGTRFPLEAAMDPDVGSNGLRAYEMTPNAHFHLDVQTQGDGS
RYAELVLDAPLDRERQAVHRYVLTAVDGGQPARTGTALLVVRVLDSNDNAPVFDQPVYAV
TLRENAPVGTLVIQLNATDSDEGANGEVVYALGGGSHAAASRARELFDVDARTGRVEVRG
DVDYEESALHQIYVQARDLGPNAVPAHCKVLVHVTDVNDNAPEITFSTVSESVSESAQPG
TVIALLSVSDRDADENGRTRAEIVGEEAPFKLKPSFRNYYTVVTDGPLDRETADAYTVTV
VARDGGTPPLATSKSIRVRVADENDNAPQFTQPSYDVHVAENNVPGAYIYAVTALDADEG
SNARVTYSIAERDIQGMSVVTYVSVNAENGYLYALRSFDYEQLREFSFTVRARDAGTPEL
ASNATVRVLVVDQNDNAPAVIAPVGKNGTAREPLPRTAEPGYLVTRVVAADADDGENARL
SYSIVRGNEDGLFRMDWRTGELRTARRVNAGAGARSQHQHQQQQQVYELLVEVRDHGQPP
LSCSTLLQVALVDSLADGGGGGGGGGGGGGGGSTRGGSGSARGASKAKDASLDLTLILIV
ALGSVSFIFLLAMIALAVRCRKDKKLNVHAALHCCCACAWCCGGACAGTGNGGAGAGGGC
CGRHSRSSKKKKKKKLSKSDIMLVQSGGGGGSGSAHNVSVSAPCGVGSAQVPVEESGSFG
SLHRKQNYCYQVCLSPEAASTDLMFLKACSPARGGAHGDPGARAALVSAYGEQQQQQQQP
DIISNGGLLSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDA
THRGHSSGADLFSNCTEECKALGHSDRCWMPSFVPTESRQGADYRSNLHVPGMDAVPDTE
VFEGDLTVGDHSSFSTFGKEPPLHTHQHHQHPHQQHLHASTLDRRECDALLCNSRTPYKA
NYPSRKRIC
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgcccgcgctctccttcgtgcttttggcgctggtgcgcggcgcgtcctcgcag
ctccgttactcggtggccgaggagtccgaactgggcactttcgtgggtaacatcgcggag
gatctggggctggacgccacgaaactctccgcgcggcgcttccagacggtgccgagctcg
cgtacgccgtacctggacgtgaacctggagaccggcgcgctgtacgtgagcgaaaagatc
gaccgggagcgcgtgtgcggcgggagccctccgccgtgcctgctgcacctggaagttttc
ctggaggaccctctggagctgttccgcgtggagacggaggtgctggacatcaatgacaac
ccgcccactttcccggagccggacgtgaccgtggagatctcggagagcgcgagcgcgggc
acgcgcttccctctcgaggccgccatggacccagacgtgggcagcaacgggctgcgcgcg
tacgagatgacgccgaacgcgcacttccacctggacgtgcagacgcagggcgacggcagc
cgctacgcggagctcgtgctcgacgcgccgctggaccgcgagcggcaggccgtgcaccgg
tacgtgctgacggcggtggacggcgggcagcccgcgcgcacgggcacagcgcttttggtg
gtgcgcgtgctcgactctaacgacaacgcgcccgtgttcgaccagcccgtgtacgcggtg
accctgcgcgagaacgcgccggtgggcacgctcgtcatccagctgaacgccacggactcg
gacgagggcgcgaacggagaggtggtgtacgcgctcggcggagggagccacgcggccgcc
agccgtgcgcgcgagctcttcgacgtggacgcgcgcacggggcgcgtggaggtgcgcggc
gacgtggactacgaggagagcgcgctacatcagatttacgtgcaggcgcgcgacctgggg
ccaaacgccgtgccggcgcactgcaaggtgctcgtgcacgtcaccgacgtaaacgacaac
gcgccagagatcaccttcagcaccgtgagcgagtcggtgagcgagagcgcgcagccgggc
actgtgatcgcgctgcttagcgtgtcagacagagacgcggacgagaacgggcgcacgcgc
gccgagatagtcggcgaggaagcccccttcaagctcaagccctccttccgcaactactac
acggtggtgacggacggcccgctggatcgcgagaccgcggacgcctacaccgtcacggtg
gtggcgcgcgacgggggcacgcctccactggctaccagcaagtccatccgcgtgcgcgtg
gccgacgagaacgacaacgcaccccagttcacgcagccctcctatgatgtacacgtggcc
gagaacaacgtgccgggcgcgtacatctacgccgtgaccgcgctcgacgcggacgaaggc
agcaacgcgcgcgtcacctactccatcgccgagcgcgacatccaaggcatgtccgtggtg
acgtacgtctccgtgaacgcggagaatggctacctgtacgcgctgcgctccttcgactat
gagcagctgcgggagttcagcttcactgtgcgcgcacgcgacgccggcacgcctgagctg
gcttccaacgccaccgtgcgcgtgctcgtggtggaccagaacgacaacgcgcccgccgtg
atcgcgcccgtgggcaagaatggcaccgcgcgggagcctttaccgcgcacggccgagccg
ggctacctggtgacgcgcgtcgtggccgcggacgcggatgacggcgaaaacgcgcgcctc
tcctacagcattgtgcgcggaaacgaggacggacttttccgtatggactggcgcacagga
gagctgcgcacggccaggcgcgtgaacgcgggagccggcgcgcgttcacagcaccagcac
caacagcagcaacaggtgtacgagcttctcgtggaggtgcgcgatcacggccagccgccc
ttatcgtgcagcacgttgctgcaggtggctctggtggacagtctcgcggatggcggagga
ggcggaggaggaggtggcggaggaggagggggcgggagcacgcgcggcggcagcgggagc
gcgcgaggcgcctccaaagccaaggatgcttctctggacttaacactgatcctcatcgtg
gccttgggctccgtgtccttcatcttcctgctggccatgatcgcgctggccgtgcgctgc
cgcaaggacaagaaactcaacgtgcacgcggctctgcactgctgctgtgcgtgcgcgtgg
tgctgcggcggcgcgtgcgcgggcaccgggaacggaggcgcgggcgccggaggcggctgc
tgcgggcgccactcgcgctccagcaaaaagaagaagaagaagaagctcagcaagtcggac
atcatgctggtgcagagcggcggaggaggcgggagcgggagcgcgcacaacgtgagcgtg
agcgcgccctgcggcgtcgggagcgcgcaggtgcccgtggaggagtccggcagcttcggc
tcactgcaccgcaagcagaactactgctaccaggtgtgcctgagcccggaggctgcgagc
actgacctcatgttcctcaaggcctgcagcccggcccgcgggggcgcacacggagacccg
ggagcgcgcgcggcgctggtgtccgcgtatggagagcagcaacagcagcagcagcagcca
gacatcatatccaatggagggctgctctccagcgagacgaagcaccagcgggcggagctc
agttaccttgtggacaggccgaggcgtgtaaacagctcggccttccaggaggcggacata
gtgagctcaaaagacagtgggcatggggacagcgagcagggggacagtgaccatgacgcc
acgcatcgtggacactcctccggagcagatttgttctcgaactgcacggaggagtgtaaa
gccctgggtcactcagaccgctgctggatgcccagcttcgtgcccacagagtcccggcag
ggcgcggattaccgcagcaacctgcacgtcccgggcatggacgccgtgcccgacactgag
gtatttgagggcgatttgaccgtgggcgatcactcatcattctccaccttcggcaaagag
ccgccactccacacacaccaacaccaccaacaccctcaccaacagcacctccacgcctcc
acgctagataggagagagtgcgatgcgcttctgtgtaactcgcgcacgccttacaaagcc
aactatccgtcgcggaaaaggatttgttag
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