Colossoma macropomum (tambaqui): 118807355
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Entry
118807355 CDS
T09004
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118807355 (rlim)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118807355 (rlim)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118807355 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
118807355
NCBI-ProteinID:
XP_036425280
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MESSDNAEQGGSEQSDSQRRQQRDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELANRLQQIKDGPEQLHNDSGSNSGGGGGGGGSSSSSSGGSSSPEGNSEQPPVPVSEG
TEEASNGDTLLDWLNTVRQTGNTTRSGHRGNQSWRAVSRTNPSSGDFRFSLEINVNRNIA
EQQTQTDAERLEGDQAPPDGPVSEPEAPMETAEVVEEPVVEEMAVMVEPELPVPDSPTVT
SQPSPQIQVLTPPIVTPVEPRRGQIRARSPSPEQRRTRARTARSRLPLNLDQLDGLPQAR
SGLPSRSHEPLSEAAPQIEGSSRTRLHVLSRQSSVQVESQESVADPEPPPAPQQGEAPAG
EAGASGRRPPTIMLDLQVRRVRPGEYRERDSIANRTRSRSQTSNNTFLYETERGGFRRTF
SRSERAGVRTYVSTIRIPIRRISDAGLGEATSLALQSMIRQIMTGFAELSYFMDSDSDSS
DSNRGSNPSTDLPDTPVNPDTASTSVPEAPVASAGISNEGDATEARTEEREGSAEPSQQR
ESRQRPRAAISLEETASLPFLRLAHFFLLNDEDDDQPRGLTKEQIDNLSMRNFGESDAFK
TCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcagacaatgcagaacaagggggcagcgaacagtccgactctcaacgcagg
cagcagcgggaccgcctggaccgagaggaggctttttaccagtttgttaacaatctgagt
gaggaagactacagattgatgagagacaacaatctgcttggcaccccaggcgagattact
gaggaagagttggcgaaccgccttcagcaaatcaaagatggccctgagcagctacacaac
gatagcggcagcaacagcggtggcggtggcggcggcggcggcagcagcagcagcagcagc
ggtggcagcagcagccctgaaggcaatagtgaacagcccccagttccagtatcggagggg
acagaagaagcgtccaatggcgacactctcctcgactggctcaacactgtgcgtcagact
ggcaacaccacgagaagtggtcaccggggcaaccagtcgtggcgggcggtgagccgaacc
aatccaagtagtggagacttccgtttcagcttggagatcaatgtcaatcgcaacatagcc
gagcagcaaacacagactgacgctgagcggctggagggagaccaagcccctccagatggt
cctgtgtctgagcctgaggcgcccatggagacagcagaggtggtcgaggagcctgtggtg
gaggaaatggctgtcatggtggagcctgagctgcctgttcctgacagtccaactgtaacc
agccaacctagtccacagattcaggttttaactcctccaattgttaccccagtagagcca
cgtagaggccagattagagcacgtagcccaagtccggaacagcgcagaaccagggcccgt
acagctaggagtcgtttacctctcaaccttgaccagttggacgggcttcctcaggcacgc
agtggcctgccttctcgcagtcacgaacccctctcggaagcagctcctcagatagagggc
agttccaggactaggctgcatgttctgtctaggcagagcagtgttcaggtggaaagccag
gagtctgtagcagatcccgagccacctccagctcctcagcaaggggaggctcctgctgga
gaagcaggagcttcaggccggcgccctccgactataatgctggacttgcaggtgcgtagg
gtgcggccaggtgagtaccgtgagagagacagcattgccaaccgcacccgctctcgttcg
cagacttccaacaacactttcttgtatgaaaccgaacgcggaggctttcgcaggaccttc
tcccgttctgagcgggcaggagtgaggacatacgtcagcacgatccgcattcccatcagg
aggatctctgacgctggtcttggtgaggccacctctttggctctacagtcaatgatccgg
cagatcatgactggttttgccgaacttagctactttatggactccgactcggactcttca
gactcaaaccgcggttccaacccctctacagatctccctgacacgccggtaaatcctgac
actgccagcacttctgtacctgaagctcccgttgctagtgccggaatctcaaacgagggt
gatgccacagaagcacgaacagaggagagggagggaagtgcggaaccctcccagcagcga
gagagcaggcagaggccgcgagctgccattagcctcgaggagaccgcctctctgcccttt
ctgcgacttgcacatttcttcttactcaatgacgaagatgacgaccagcccaggggcctc
accaaagagcagatcgacaacctctcaatgcgcaacttcggcgagagcgatgcgttcaag
acctgcagtgtctgcatcacagagtacgcagaaggtaacaagctccgcaagctgccctgc
tcgcacgaataccacgtgcactgtatcgaccgctggctttcggagaactctacttgcccc
atctgccgcagggcagtcctcgtttctgccaaccgcgagagcgtcgtctag
DBGET
integrated database retrieval system
