Colossoma macropomum (tambaqui): 118807648
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Entry
118807648 CDS
T09004
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
118807648 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118807648 (xrcc5)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
118807648 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
Peptidase_M57
SusD-like_2
Motif
Other DBs
NCBI-GeneID:
118807648
NCBI-ProteinID:
XP_036425579
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MARASKSALVLCMDVGFSMSNSGPGQEAPFEQAKKVIQKFIQRQVFAENKDELALVLFGT
DETKNPLAQDGQYQNICVHRHLMLPDFELLEEIEDQLQPGSQHADWLDALVVCMDLLQKE
TMGKKFERLNISLLTDLNTPTCADQLDVIITNLKKAGITLQFFLPFPVDADEGADGGGDA
AGPRHPPHGGKGLSREQKQGLEMVKQVMTSLDEEDGLDEVYTFSDAVEKLSIFKHIERRP
MAWPCQLTIGSSLSIRIVGYKAVCEEKMKKSWAVVDAESHQKDDVKRETVYCLSDDNETE
VQKDDTIQGFRYGSDIVPFSKVDQEQMKYKSDGKSFAVLGFAKQELINRHQFMGNQVIKV
FAPREDEHAAVALSALIRALDSLKMVAIVRYAYDRRSNPQVGAAFPCLKEKYECLQYVQL
PYMEDLRQFIFPSLENNKKFAPSEAQLSAVDSLINSMMLVEEGEDGKKEDIFKVNHIPNP
QFQRLFQCLHHRGVNPGAPLPPVDPWLKRILDRPQAVSARCQGPLQEMKKSFPLKEVVRK
KEQKTSVDVFGNGEEPNAKKLKLDEEDKFNLAEISEGNVTSVGSVNPAKDFRALIQHKTI
PFDQACEQLTHRMEQLLGNRSTDYYMKTITCIQAFREQSVKVSNAELFNIYMQSLKKSVP
DSSPQEFWDLLVQDALTLISKDEVESSTVSKQEADQFLMSEEEKEDAVIPIQDDAGDVDD
LLDMM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagcgtctaagtctgctttggtcctttgcatggatgtgggcttctctatgagc
aactctggtcctggtcaggaagccccattcgagcaagctaagaaggtcatccagaaattc
atccagcgccaggtttttgctgagaacaaggatgagttggccctggtcctttttggtaca
gatgagacaaagaatccactggcccaagatggccagtaccagaacatctgtgtacaccga
catctgatgttgccagattttgagctgctggaggaaattgaagatcagcttcagcctggt
agtcagcatgcagactggctcgatgcacttgttgtatgcatggatcttctacaaaaagaa
accatggggaagaaatttgagaggctgaatatctccctcctcactgacctcaatacaccg
acctgtgctgatcaactggacgtcatcattaccaacttgaagaaagctggcattaccttg
caattcttcctgccattccctgtggatgcggatgaaggagctgatggaggaggagatgcg
gcaggtccaaggcatccaccccatggtggaaaaggcctgagtagggagcagaagcagggg
cttgaaatggtcaagcaagtcatgacttctcttgatgaagaggatggcctggatgaggtc
tacaccttcagcgacgctgtggagaagctgtccatctttaagcatattgagagacggccc
atggcttggccctgtcagctcaccatcggcagctccctttccatccgcattgttggatac
aaagcagtgtgtgaggagaaaatgaagaagtcctgggctgttgtggatgctgagagtcac
cagaaagacgatgtgaagagagagacggtgtattgcctcagcgacgacaacgagactgaa
gtacagaaagatgacactattcagggtttccgttatgggagcgatattgtcccgttctct
aaagtggaccaagagcagatgaagtacaagtcagatggaaagagctttgctgtgctaggc
tttgctaagcaggagctgattaatcgtcatcagttcatgggcaaccaagtgattaaggtt
tttgctcccagggaagatgagcatgcagccgttgcactctctgctctaatccgcgcgctg
gacagtctgaagatggtggctattgttcgctatgcttatgaccgccgcagcaacccacaa
gtaggagctgcttttccctgcctcaaagagaaatatgagtgtctgcagtatgtccagttg
ccatacatggaggacctccgacagtttattttcccctcattggaaaacaacaaaaagttt
gctccctcagaggctcagctgtcagcagtggattctctcatcaactccatgatgctggtg
gaggagggtgaagacggaaagaaggaggacatcttcaaagtcaaccatatccccaaccca
cagttccagaggctcttccagtgcctacaccatcgtggagtgaacccaggtgcccccttg
cctcctgtagacccttggctaaagaggatactagaccggccccaggccgtctcggcccgc
tgccaaggccccctgcaggagatgaaaaaaagcttccctctgaaggaggtggtgcggaag
aaggagcagaagactagtgtggacgtgtttgggaatggtgaggagccaaatgctaagaag
ctgaaactggatgaagaagataagttcaatctggctgagatttcagagggaaatgttacc
tcggttggtagtgttaaccctgcaaaagacttccgtgctttaattcaacacaaaaccatt
ccctttgaccaagcatgtgagcagctaacccacaggatggagcagttgctgggcaacagg
agcactgactactacatgaagaccatcacctgcatccaggcctttagggagcagtctgta
aaggtttcaaatgcagaacttttcaacatctacatgcagtctctgaagaagagtgttcca
gacagtagtcctcaggaattctgggatctgcttgttcaagatgctctaacattaatcagc
aaggatgaagtggagagcagcacagtgtccaaacaagaggcagaccagtttttgatgtct
gaagaggaaaaggaggatgcagttattcctatccaggacgatgcaggagatgtggatgat
ttgctggacatgatgtaa
DBGET
integrated database retrieval system
