Colossoma macropomum (tambaqui): 118808002
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Entry
118808002 CDS
T09004
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmao01002
]
118808002 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118808002 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmao04147
]
118808002 (usp13)
Enzymes [BR:
cmao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118808002 (usp13)
Peptidases and inhibitors [BR:
cmao01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118808002 (usp13)
Ubiquitin system [BR:
cmao04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118808002 (usp13)
Exosome [BR:
cmao04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118808002 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_9
UBA_DHX29
UBA_4
Motif
Other DBs
NCBI-GeneID:
118808002
NCBI-ProteinID:
XP_036426190
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MATDLGELLVPYMPTIRVPRSGDRVYKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAVPRRRNGKVFLDLELNRDFNGDDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAGSAYKKQESDSWEEELQVSKHARSLRQQE
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETKFPLAVK
LDTITPDGADIYSFDEEEAVLDPHISEHLTHFGIDMLKMQRTENGHHTDNHMQSRASEWE
VIQESNLKLKAVYGSGYTGIKNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFSTQMAKLGHGLLSGQYSKPPIKSELIEQVMKEEYKVFDKQQHRGISPKMFKALVS
KGHPEFSSNRQQDAQEFFLHVINVVQRNSAGSENPSDVFRFIVEERVQCCQTQKVRYTQR
VDYLMQLPVPMEAAINREELIAYEAKRKDAEENMRAPPEPVRARVPFTACLQAFTEPENV
PDFWSSALQAKSAGVKTSRFGSFPDYMVVQLKKFTFGVDWVPKKLDVSVDVPDFLDLNRL
RATGLQAGEEELPDLTPPIVIPEDTRDNSMNNSLESPEIDESSVMQLAEMGFPLEACRKA
VYYTGNMGAEMAFNWIIAHMEEPDFAEPLAIPSYMEPDLPSPSLPTASPLDNQPPEESIA
ILTSMGFPRHHTIQALKATNNNLERALDWIFTHPESEEESEAMSDMADTEPNDTSFSNAN
AHSDSTLSPDQELSSPRVRDGPGRYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYRRLSSC
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctacagacttgggagagctactggtcccgtacatgccaactataagggtgccgaga
tctggagacagggtttacaagagcgagtgtgctttttcctacgattctccagagtctgaa
ggtgggctgtatgtgtgtatgaacacattcctaggcttcggaagagaacacgtggagaga
cattaccgcaagactggacagagcgtgtacatgcacctaaagcgtcatgttaaggagaaa
gccacaggtgctgctggaggtgctgtcccgagaagacggaatggaaaagtgtttttagat
ttagaacttaaccgtgattttaacggggatgattatgaatatgaagatgaagccaagctt
gtcatattcccagaccactttgagattcctttaccaaatattgaggagttgcctgcactg
gtgaccattgcttgtgatgctgtactaaatgctggatctgcatacaaaaagcaagagtca
gattcttgggaagaggagcttcaagtgtccaaacatgccagaagtctcagacaacaagag
aacggggttcgaattccccccagtggctggaagtgtgccaagtgcgaaatgagagagaac
ctgtggctgaacctgacggatggctctgtcctctgtgggaaatggttctttgatggaagt
ggagggaacgggcatgccctcgagcactacagagaaaccaaattccctctggcagtcaaa
ctagacaccatcaccccagatggagcagacatttattcctttgatgaagaagaggcagta
ctcgaccctcacatatcagaacacttgacacactttggaatagatatgctgaaaatgcaa
aggacagagaatggccaccacacagataaccatatgcagtcacgagccagtgagtgggag
gtgattcaggagtccaacctgaagctgaaggcggtttatggttcaggctatacaggcatc
aaaaacctgggcaacagctgctacctcagcaccactatgcaagttctcttcagcatccca
gagttccagagagcgtatgtcgggaatctacagagaatatttgactactctccgcttgat
cccacccaagacttcagtacgcagatggcgaaactgggtcatggacttctttcaggccag
tattccaaacctccaatcaaatcagaactcattgaacaggtgatgaaagaagaatacaag
gtatttgacaagcagcagcacagaggaatttctcccaagatgttcaaggctctggtcagc
aagggccacccagaattctcctcaaacagacaacaggatgcccaagaattcttcctgcat
gttatcaatgtggtacagaggaatagtgctggatcagagaaccccagcgatgtgttccgg
tttatcgtagaagagcgtgtacagtgctgtcagacacagaaggtgcgctacacccaaaga
gtagactaccttatgcagcttcctgtgcccatggaggctgccatcaacagagaagagctg
atagcgtatgaggctaagcggaaggatgctgaggagaacatgcgggcccctccagagcca
gtgagagctcgtgtccccttcactgcgtgcctacaggccttcacagagcctgagaatgtt
ccagacttctggagctctgcactgcaggccaagtcagctggagtgaaaacttctcgtttt
ggttccttccctgactacatggttgtacagctcaaaaagttcacatttggagtggattgg
gttccaaaaaagttagatgtttctgtagatgtgcctgattttttggacttgaatcggctc
cgggccacaggattacaggcaggtgaagaagagctccctgaccttacaccacctattgtc
attcccgaggacacaagagacaactcgatgaataattctttggaatctccagaaatagac
gagtcctccgtgatgcagctggcagagatgggctttcccctggaggcctgccggaaggca
gtgtactacactgggaacatgggagctgaaatggcctttaattggatcatcgctcacatg
gaggagccagactttgccgagcctctcgcgattccttcgtacatggagcctgacctgccc
agtcccagcctccccactgccagccctctggacaaccagccgcctgaggagagcattgcc
atcctcacctccatgggcttccccagacaccacaccatccaggccctcaaagccacaaat
aataacttggagcgggcactggactggatcttcacccacccagagagtgaggaggagagt
gaggccatgtcagacatggctgatacggagcccaacgacaccagcttctcaaatgccaac
gcacacagtgactccactctgtccccggaccaggagctgtcaagtccccgtgtccgagat
ggccctggacgatatgaactctttgctttcataagtcacatgggaacatccacaatgtct
ggtcattatgtatgtcatatcaaaaaggaaggaagatgggtgatttacaatgatcacaaa
gtatgtttgtcagaaaggcccccaaaagacttaggctacatttacttttaccgacgcctg
tccagctgctag
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integrated database retrieval system
