Colossoma macropomum (tambaqui): 118808099
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Entry
118808099 CDS
T09004
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmao01002
]
118808099
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118808099
Enzymes [BR:
cmao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118808099
Peptidases and inhibitors [BR:
cmao01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118808099
Ubiquitin system [BR:
cmao04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118808099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
118808099
NCBI-ProteinID:
XP_036426403
LinkDB
All DBs
Position
Unknown
AA seq
2557 aa
AA seq
DB search
MTATTRGSPVGSSDNQGQSQAPDGQSQTLLPQNQTPSPNSSNETSPLSPPEEQGQSDAQQ
AQEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVVKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSESVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQILH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKFFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILR
FVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTN
ASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDY
SCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFY
RHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHTGFDPQTVRVGSRYSHVQEVQERL
NFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKD
FFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVV
IQGSDDIATRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKD
SINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQ
VDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIVDPADDRKLIGQLNLKDK
TLITAKLTQVSSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHLRYI
SFLWQVADLGCTLNMPLLRDGARVLMKLIPPDNTTVENLRAICLDHAKLGENSLSPTLDS
RFFGPSPSQVLYLTEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLGMLTRNNFLPN
ADMETRRGAYLNALKIAKLLLTAIGFGHVKAVAEACQPVVEGTNPASPINQATHDQALVL
QNALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQKIVWASGCGSV
QLVFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEAMTLCFALMPTALDTLSKEKAWQT
FIIDLLLHCQSKLVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKERAKHAGD
YFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVT
KELLAFQSPEKKFCIGCEKGGANLIKELIDDFIFPASNVYLQYVKTGEFPAEQAIPVCSS
PATINAGFELLVALAVGCVRNLKQIVDTLTEMYYQGCEALTEWEYLPPVGPRPTKGFVGL
KNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQDSESNVDPRDEVFS
YHHQFDDKPSLNKAEDRKEYNIGVLRHLQVIFGHLAASQLQYYVPRGFWKQFRLWGEPVN
LREQHDALEFFNSLVDSLDEALKALGHPSMLSRVLGGSFADQKICQGCPHRYECEESFTT
LNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKR
FDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDELSPESQVIHQNPPLESESGR
SSRYRLVGVLVHSGQASGGHYYSYIVQRHGDGSDGQRDRWYKFDDGDVTECKMDDDEEMK
NQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTAGGDSELLKYIAELTLTPK
PHQLKMPSAIECSVRKQNVQFMHSRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEA
EEIAMISIQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRSWFAHNVLFAFP
TRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPAPVTSPGSSTQTCDNLTLSDHLL
RAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLSVPATFMLVALDEGPGPP
IKYQYAELGKLYTVVSQLVRCCDVSSRMQSSINGNPALPNPYGDSNLTAPIMPLQQLVAE
ILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYL
DLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSN
CSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYSYNNWSPPVQSNETSNGYFL
ERSHSARMTLAKACELCPEEEPDDQEAPDDHDSSPPEDTALYPHSPGTQYQQPNNHPHGQ
PYTGPAAQHMNNPQRPPQRPQESWEGTEEVPPVQTKE
NT seq
7674 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaccacccggggctcccctgtggggagcagcgacaaccagggccagagccaa
gctccggatggccagagccaaaccctgcttccccagaaccagacgccctctcccaactcc
tctaatgaaacgtctccgctgagtccaccagaggagcaggggcagagtgatgctcagcag
gcacaggaagaggaggagccagcctttccccacacagacttggccaagctggatgacatg
atcaaccgacctcgctgggtggtcccagtcttgccaaagggggagctggaagttctactt
gaagctgctatagatcttagtaaaaaagggcttgacgtgaagtgtgaggcatgtcagagg
tttttccgagatggtctgacaatctcgttcacgaaaatactgacagatgaggcagtgagt
ggctggaagtttgaaattcataggtgcatcatcaataacactcaccgcctggtggagctc
tgtgtggtcaaactgtctcaagattggtttcctctgcttgagctactagccatggcaacc
aaccctcactgcaagtttcacatctacaacgggactcgcccgtctgagagtgtgcctgct
ggtgcccagctcgctgatgatgagctgtttgcacgtccaccagaccctcgttcacctaag
ggctggctggtggacctcataaataaatttggcacactgaacgggttccagattctgcat
gatcgtttcatgagtggccaggctcttaatgtgcagataattgcagctctcatcaagcct
tttgggcagtgttatgagttcttgacgttgcacacagtgaagaagttcttcttgcctgtg
attgagatggttccacagtttttggagaacctcacagatgaggaacttaagaaagaggcc
aagaatgaggccaagaatgatgccctttccatgatcatcaagtcactgaagaatttggcg
tctagagtaccaggccaagaagaaaccgtcaagaatttagaaatctttaggttaaaaatg
atccttaggttattgcaaatttcatcttttaatggaaaaatgaatgcactaaatgaagtg
aacaaagtgatctccagcgtttcatattacacccatcgccatggaaacccagaggaagag
gagtggctcactgctgaaagaatggcggaatggattcagcaaaataacattctgtcgatt
gtgctgagagacagtctgcaccagcctcagtatgtggagaaactagagaagatactgcgc
tttgtcattaaagaaaaagccctcactttacaggacctggacaacatctgggctgctcag
gctggtaagcatgaggccattgtgaagaatgtccatgatctgctggcaaagctggcttgg
gacttctctcctgagcagctggaccatctctttgattgtttcaaggcaagttggacgaat
gcgagcaagaagcagagggaaaagctgctggagttgatccgcagacttgcagaggatgac
aaggatggagtgatggctcacaaggtgctcaacctgttgtggaacttggcacacagtgat
gacgtccctgtcgacatcatggatcaggccttgagtgcccacatcaagattttggactac
agctgttctcaggaccgagacacacagaagatccagtggattgaccgtttcattgaggaa
ctacgaaccaatgataagtgggtgatcccagctctgaaacagatcagagagatctgtagc
ctgtttggagaagcccctcagaacctcagccagacgcagcggagtcctcacgtgttttac
cgtcatgacctgatcaaccagctgcagcacaaccatgctctggtcaccctggttgcagag
aacctgtctgcttacatggagaacatgagacagttctctaaagagcacacaggcttcgat
cctcagacggttcgagtgggcagccgctacagccatgtgcaggaagttcaggagaggctc
aacttcctgaggtttctgctgaaggatgggcagctgtggctgtgcgctcctcaggctaag
cagatctggaagtgcctggcagagaacgcagtcttcctctgtgacagagaagcttgtttc
aaatggtactctaaactcatgggtgatgagcctgaccttgatccggacatcaacaaggac
ttctttgagaacaatgtgctacagctggacccctcacttctgacagagaacgggatgaag
tgctttgaacgcttctttaaagcagtgaactgtagggagggcaagctagtagcgaagcgc
agggcatacatgatggacgatctagaactcattggcctcgactacctctggagggttgtg
attcaagggagtgacgacattgccactcgtgcaatagacttgctgaaagagatttacacc
aaccttggaccaaaactacaagtcaatcaggtagagatccatgaagacttcatccagtcc
tgttttgaccgtctgaaggcctcgtatgacacgctttgtgtgttggatggggacaaggac
agcataaactgtgctcgccaagaagcaattcgtatggtcagggtgctgactgtgcttaaa
gaatacattaatgaatgtgatagcgactatcatgaggagcggaccattcttcccatgtct
agggcgtttcgtgggaagcacatcaccctggtggtgcggtttcctaaccagggccggcag
gtggatgacctggacatctggtctcacaccaatgacacgattggctctgtgcgtcgctgc
atcctcaaccgtatcaaagccaacagcacacacaccaaaatcgagctttttattggagga
gagattgtggacccagcagatgatcgcaagctgattggacagctcaaccttaaagacaaa
actctgatcacagcgaaactgacccaggttagctccaacatgccctctagtcctgacagc
tcctctgactcgtccacggggtcacctggtaaccatggcaatcactacagcgatgggccc
aacccggaggtggagagttgcctacctggagtgatcatgtcgctgcacctgcggtacatc
tcattcctctggcaagttgctgatttgggctgcactttaaacatgcctctgttacgggat
ggggccagggtccttatgaagctcatacctccagataacactacagtggagaacctgcga
gcgatttgtctggatcacgccaagctgggagagaacagccttagccccacgctagactcc
cgattcttcggaccctccccgtcacaagtgctctacctcactgaggttgtgtatgctctt
ctgatgccagccagtggcactctaggagaagatgccagtgacttccagtacaacttcctg
aagagtggaggtctccctctagtactcggcatgcttacaaggaacaactttctgccaaat
gctgacatggagacgcgccgtggagcctacctgaacgccctgaagatcgctaagctcctg
ctgactgccattggctttgggcatgttaaagcagtggcagaggcgtgccaacctgtggta
gagggaaccaaccctgcatcgccaataaatcaggcaactcatgaccaagctttggtgctt
caaaatgctctccagaacattcccaaccctgcctccgagtgcatgctgcgcaatgtagct
attcgactggcccagcagatctcagatgagaatttcttccaggcttcaaagtacatccca
gacatctgtgtaatacgggcagtacagaagattgtgtgggcgtcaggctgtggaagcgtt
cagctggtcttcagctccaatgaggagatcagcaagatctatgagaagactaatgcaggt
aatgagccggatgcagaggacgagcaggtgtgctgtgaggctctggaggccatgacgctg
tgcttcgctctcatgcccacagccttggacacactcagcaaggaaaaggcttggcagact
ttcatcattgacctgcttttgcactgccagagcaagttggtccgtcagatggctcaggag
cagtttttcctcatggccaccaggtgttgcatgggccaccgacctcttctctttttcatt
accctgctctttactgttctgggaagcactgcaaaggaaagagcaaagcatgcaggtgat
tactttacccttttgaggcacttactcaactatgcatacaacagcaacatcaacctgccc
aacgctgaggtcctgctcaacaatgagattgactggctgaagagaatcagggatgaggtg
aagagaacaggggagactggggtggaagagactattctagaaggtcacctgggggtcacc
aaggaactattggctttccaatcccctgagaagaaattctgcattggctgtgagaagggt
ggagcaaacctcatcaaggagctgatagatgatttcatcttcccagcatctaatgtttac
ctgcagtatgtgaagactggggagttccctgccgaacaggcaatcccagtgtgcagtagt
cctgctacaatcaatgctggctttgagctgcttgtggcccttgctgtgggatgtgtacgc
aatttgaagcagattgtggacacgctcacagaaatgtactaccaaggttgtgaggctctt
acagagtgggagtacctcccacctgttgggccgcgacccactaaaggatttgtaggcctg
aagaacgcaggagccacgtgctacatgaactcagtgatccagcagttgtacatgatcccc
ccaatccgaaatggcattctggccattgagggcactggcagtgatgtggatgatgatatg
tctggagacgaaaagcaggatagcgagagtaatgtggacccaagggatgaagtgttcagt
tatcaccaccagtttgatgacaagccctctctcaataaggctgaggaccgcaaggagtac
aacattggagtgctgcgccacctgcaggtcatctttggccatcttgctgcatcccaactg
cagtattatgtacccagaggcttctggaagcagttcaggttatggggggaaccagtcaat
ttgagggaacaacacgatgcccttgagttttttaactctctcgtggacagcctggacgag
gcactgaaggctcttggccatcccagcatgcttagcagagtcctgggtggctcatttgca
gaccagaagatctgccagggatgtcctcacaggtatgagtgtgaagagtccttcaccaca
ttgaatgtagacatcaggaaccatcagaacctcctagactccatggaacagtatgtcaaa
ggggacttgctggaaggagccaatgcttaccactgtgaaaaatgcaacaagaaggttgat
acagtgaaacgcctcttgattaagaagcttcccccagtactggccatccagctcaaacgt
ttcgactacgactgggaacgtgagtgtgccataaagttcaatgactacttcgagttccca
cgtgaactcgacatggagccatacacagtggcgggtgtcgctaagctggagggtgacgag
ctgtctccggagagtcaggtcatccatcagaacccacctttagagtcggagtcaggcaga
agctcccgttatcggctggtgggtgtgttggtgcactcaggccaagctagcggtggacac
tactactcctacattgtccaacggcatggcgatggaagtgatggccagcgggatcgctgg
tacaagttcgatgatggcgacgtcactgagtgcaaaatggatgatgacgaggagatgaag
aaccagtgcttcggtggagagtacatgggcgaagtgtttgaccacatgatgaagcgcatg
tcgtaccgccggcagaagcgctggtggaatgcttacatacttttctatgagcgcatggac
acagctgggggcgacagcgagctgttaaagtatatagctgagctaacgcttacaccgaag
cctcaccagctcaaaatgccctcagctatcgagtgcagtgtgcgcaagcagaatgtacag
ttcatgcacagccgcatgcagtacagcctagagtacttccagttcatcaaaaaattactg
acctgcaatagtgtgtacctgaaccctcctccaggtcaagatcacctactacctgaagct
gaagaaatagcaatgattagtattcagcttgctgctagattcctgttcagcacaggattc
cacacaaagaaagtagtccgaggacctgctagtgactggtacgatgccctgtgcatctta
ttgcgtcacagcaagaatgtccgcagctggtttgcacacaacgtcctctttgccttcccc
acacggttctctgagtatttattggagtgtccaagcgctgaggtccgaggagccttctcc
aaactcatagtgttcattgcacacttttcgctacaggatggaccatgccccgctcctgtt
acctcaccagggtcctccacgcagacctgtgacaatctgaccctgagtgatcacctgttg
cgagcagtacttaacctgctgaggagggaagtgtctgagcatggacgtcaccttcagcag
tacttcaacctctttgtcatgtatgccaacctgggtttggcagagaagacgcagctgttg
aagttgagtgttccagctacattcatgttggtcgctctggatgagggtcctggtcccccc
attaagtaccagtatgcagagcttggcaagctgtacacagttgtgtctcagctggtccga
tgttgtgatgtgtcatcgcgcatgcagtcctcaattaacggtaatccagctcttccgaac
ccttatggtgactccaacctcacggcccccataatgcctcttcagcagctggtggcagaa
atacttttcgtgcgcacaagctatgtgaagaagatcattgaggactgcagtaactctgag
gagacagtcaaactgctgcgtttctgctgctgggagaaccctcagttctcttccaccgta
ctcagtgaacttctgtggcaggtggcatactcctatacttatgagctgaggccttatctg
gacctcctactccagatcctgctgattgaggactcatggcagacgcataggatccacaat
gtgctcaagggaattcctgatgaccgggatggcctgtttgataccatccagcgctccaag
aatcactatcagaagagggcttatcaatgcatcaaatgcatggtggctctcttcagcaac
tgctctgtggcataccagatcctacagagtaatggggacttgaaaagaaaatggacatgg
gcagtggagtggctgggcgatgagctggagaggaggccatacacaggaaaccctcagtat
agctacaacaactggtctcctccagtacagagtaatgaaacctctaacggctactttcta
gaacgatctcacagtgccaggatgacgttggctaaggcctgcgaactctgtcctgaggag
gagcctgatgatcaggaagctccagatgaccatgattcttcccctccagaggacacagca
ctctacccccactcacctgggacacagtatcaacagccaaacaaccacccccatgggcaa
ccttacacaggcccagctgcccagcacatgaacaaccctcagcgccccccccagaggcct
caggagagctgggagggcacagaggaggtgccccctgttcagacgaaagagtag
DBGET
integrated database retrieval system
