Colossoma macropomum (tambaqui): 118808120
Help
Entry
118808120 CDS
T09004
Symbol
obsl1a
Name
(RefSeq) obscurin-like protein 1a isoform X1
KO
K19574
obscurin-like protein 1
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118808120 (obsl1a)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
118808120 (obsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_4
C2-set_2
V-set_CD47
Receptor_2B4
fn3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
118808120
NCBI-ProteinID:
XP_036426456
LinkDB
All DBs
Position
Unknown
AA seq
2280 aa
AA seq
DB search
MDVFGGAPRVLGYPRPVLVKSGSDAVLKCQIGGDPQPDVVWERKNEPIVPDGRYRIAQDG
KVYTLFISGITLADAGQYICRAKNSIGETYTAATLKVEEQAQEVQLIQPTQEQEEVKVIP
PEQEIKTLKQPQQPQPQSQKEEDLSQDNKPRFLIKPLSLRVDRGEDAAFSCKLWGDPLPE
VVWEKDGKQLKEIYESSHFHIGQQDGGWFQLKIFRTRAPDGGVYTCKAVNSLGEAVAGAV
LLVEPIPEQRGESYQNGYTNGHWSPHQNKDKYPRVRHSKEPQLNVAKAKKFTVTEGKHAK
FRCYVTGKPKPEIVWKKDGEPIVPGRRHLLFEDREGYYTLKVLYCKQQDTGLYICAASNA
LGNTLSAVHLSVKGPLVRFKRALQDVEVRERDVAVLECEVPEESIPTAWYLEDQRLQPGS
KYGMEQKGTRRLLTIRDVGADDDGVYLCEMPNGGKSIAELAVKGTIVKKLPRRLEVLEGE
NAAFCVEVEEEEMEVFWFKDGLQLRETHQTIIKSFGKTHILVFVNCSYQDSGMVTFVAGR
SKTSSKLRVKAIRHCPPICPVGVQMNTECPNGVVLSWSPSPNLQNSTKSVYVVEFQEVGS
QEWQRCVTTETGTSAEILGDIVPYEGDYRFRICCINKYGRSGHVEFPKVVHLAPGPKIKT
SLKNAVVTEGEDAVFSIELSAPMIGTWFLNSTQLQASERFSISQSKTLHTLRFHNVPNVY
NGAEITFIAAGVRDSAVLQVQAAVAKFIPLAEADKNKKVESGNPIVLYCEISNPVADVRW
FKDGQELHREEGLNIQSDGNMRRIVIQSPEYSHSGVYTCQSNDDVITFNVDIKAPRATFQ
SLTEAERNRSVDTGHPLVLRCELSDPDTEVCWLKDGEPICPQSGIDMQTNGNTKTLVIES
ADFYHSGTYTCWSADDVAVFEVDITGTPVSFKEIPAEERQKSVIELDPVVLHCELSRPDA
TARWIKDGVEVLQSDNVTIQAEGNMRRLIIRSAQLSDAGAYTCQAGDNTMSFTVNVKEQP
VMIVDPKDDVHMDHYVSEEIILNCELSRSNGQACWFKDGLKVQESENIQLSAEGPYRRLT
ILCASRRDSGEYVCDTGADSVFFQLNVTEAPVRIVSPSKSEVEVLLLASERLVLSCEISK
AEADVCWYCDGMEVEESEELILEEDGVHRRLIIPRTTIDDSAEYVCETANDSVTFWVKIE
EPPVKLSTSKKTDDIIQNFAGDAVVLELEVSRENAEVCWMKDGVKMEESSNITIHMDGLI
RKLIIHSPTLADSGLYTCNAIDDTMDFQVKISEAPLKILKKDEVNTEYKAQLSDDVVLEC
ELSRPNGEVKWYKNNDHIEENERFCFEEEGAFRSLVILCAELEDSGEYILDAKDDSISFH
VTVQEPPVKVLGNSGQSDVQEMVEGDDLVLACEVSRANAPVQWLFNEKPLLPDSRTYIES
YGTLRKLIISNIQPSNSGKYTCDAVDDKMMTLVKVQEPPVEFLDKEDVIMVTGYEAESIT
LTAMVSRHNAPVRWLKDWTSVSGERFHADSQGLTRTLSINPLKRSDSGEYTCDANTDELR
FSLLVKEMRIKFVKPLFDTVAHKDGMITLRCEVCKPKADVQWLKDGVEIIPSRRFSIRAD
GTERSLTIHRITKEDAGEYACESRDDYTSAKIKVEMPRVVEFLTELHNTTVMEGEEATFK
CVVSPDDVQMVWFMDGEIIKPSERFIIEQNGLCHTLIIRSVQLLDSSRITAEAEGVISKA
SLKVQEAQVLFTKKMEVVMAEEFGEATLETEVSLESGEVQWMRQGVVIQPGPRHTLTQSG
RKRSLKITNLSLSDRGTYRCETLHDRTQVKLNVEPRKITICKGLMDIETFERETASFELE
LSHADVEGVWQKDGLRVKPNNTIWVSANGCVHSLTLTNLTLEDTGTIAFSADGLRTSARL
VVKETPVAIIKKLSDIRLEEGSPVMLECELSRQNVEVRWLKNGVELKSDKGLRIYSMGRK
RCLQIMQSSVSDSGLYTCEIGDLCTFCKLEIYERELEIITELEDLYIKEDQNAVFMCEVS
MEDMPGEWYKNGHRIRPSSTIKTRREGTKHFLLICNVTTEDAGEIKFVSKQVESVAYLEV
QELPVSIVRPLRDRTALEKHRVILECTVSSPHCEVTWYKGDEELESSERMEIFSEGCYHK
LVIHQVAVEDEGTYNIEVGEHSSTAKLMVEAQSIMLVKELEDVEVNAPDPARFQCKVSVP
LIKHPVWTLNGETIQPGPDIRLENKGTLYSLTFKNTSSDMSGTVKFTTGKAKSSAKLRVL
NT seq
6843 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtttggtggcgctccccgtgtgcttgggtacccacgtccagttctggtgaaa
agcggctcagatgcggttctcaaatgtcagattggtggagacccccaacctgacgtggta
tgggagagaaagaatgaacctattgtcccagatggtcgctaccgcattgcccaggatgga
aaagtttataccctcttcatctctggcataactctggcagatgctggacagtatatctgc
agagctaagaacagcatcggggagacttacacggctgctactctcaaagtagaagagcaa
gcacaagaggttcagctgatacagcccactcaagaacaggaggaagttaaggtcattcca
cctgaacaagaaatcaagactcttaaacagccacaacaaccacagccacaatcacagaag
gaggaagatctgtctcaggacaataagcctcgattcctcatcaaaccgttatctttgcga
gtggacagaggtgaagatgccgctttttcttgcaagctgtggggtgaccccttgcctgag
gttgtgtgggagaaggatggcaagcagctcaaagagatctatgagagctcacactttcac
attggccagcaagacggagggtggttccagctgaagatcttccggacgcgagccccagat
ggaggagtgtacacctgcaaggcggtcaacagtctcggggaggctgtggctggagctgtg
ctgttggttgaacccatcccagaacaaagaggggagagttatcagaatggatataccaat
ggacactggtccccacaccagaacaaggacaagtacccaagagtgagacactccaaagaa
cctcagctaaatgtcgccaaggccaagaagttcaccgtcacagagggtaaacatgccaaa
tttcgttgctacgtcacaggtaaacccaaaccagagattgtgtggaagaaagacggagag
cccattgtgcccgggcggcgccatctactgtttgaggacagggaggggtactacactttg
aaagtcctttactgcaagcagcaagacactggtctctacatctgtgcggcatcaaatgct
ctggggaacacactgagcgctgtgcatctctctgtaaaagggccgctggtgcggttcaag
cgggccctgcaggatgtggaagtgagggagagggatgttgctgttctggagtgtgaggtt
ccggaagaatccatccccacagcatggtacctggaggatcagaggcttcagccagggagc
aaatatggcatggagcagaagggcacaagacggctgctcactatacgagacgtgggagca
gatgatgatggagtttacctgtgtgagatgcctaatggaggaaagagcatagcagagctg
gctgtgaaaggtacaattgtgaagaagcttcctcggaggctggaggtgctggagggagag
aatgcagcattctgtgtggaggtcgaggaggaggagatggaggtgttctggtttaaagat
ggcctacagttgcgggagacgcaccagaccatcatcaaatcctttgggaaaacccacatc
ctggtctttgtcaactgctcttaccaagactccggcatggttacatttgtggcaggcaga
tctaagacaagctccaaactgcgagtcaaagcaattagacactgtcctcccatctgtccc
gtgggagtccaaatgaacacagagtgcccgaatggtgtcgttctgtcctggtcgccctct
cctaacctgcagaattccactaagtctgtatatgtggtggagttccaggaggtgggctcc
caggagtggcagcgctgtgtgaccacagagacgggcacctcagcggagattctgggagac
attgtgccatatgagggtgactaccgcttccgtatctgctgtataaataagtatggcagg
agcggccatgtggagttccccaaagtggtgcatttggcccccggtccgaagatcaaaacc
tcgctaaagaatgcagtggtgactgagggggaggatgcagtgttctccatcgagctctca
gcccctatgattggcacctggttcctcaacagcactcagctgcaggccagcgagcgcttt
agcatcagccaatcaaaaaccctacacactctgcgctttcacaacgtgccgaatgtgtac
aatggagccgagatcacgtttattgccgctggagtccgtgactcagcagtgctgcaggta
caagctgctgtggcaaagtttatccctctggcagaggcggataagaataagaaagtcgag
tctggaaatccgattgtgctgtactgtgagatctctaaccctgtagcggatgtgcgctgg
ttcaaagatgggcaagaacttcaccgagaggaggggctgaatatccaatcagatggcaac
atgagaagaattgttatccaatcaccagagtattcccactctggagtgtacacctgccaa
tcaaatgatgatgtcatcaccttcaatgtggatattaaagcaccacgggccacgttccag
agtttgaccgaggcagagaggaacaggtctgttgatactggacatccgttagtcctccgc
tgcgagttatctgacccagacacagaggtttgctggctaaaggatggggaaccgatctgt
ccccaaagtggaatagacatgcagactaacgggaacactaagacgctggtcatcgagtca
gctgatttctaccactctggcacatacacttgttggtctgctgatgatgttgctgtgttt
gaggtggacattacaggtaccccagtgtcgtttaaggaaattccagcagaggagaggcag
aagagtgttatagagctggaccctgtggtgctgcactgtgagctctccaggcctgacgcc
accgcccgctggatcaaagatggagttgaggttcttcagagtgacaatgtcaccatccag
gcagagggcaacatgcgcaggctcatcatccgctcagcacagctgagtgacgccggcgcc
tacacatgccaagcaggagacaacaccatgtccttcactgtcaacgttaaagagcaacca
gtcatgattgtggacccgaaagacgatgttcatatggatcactatgtctcagaggagatc
attctgaactgtgagctctctcgctcaaatggacaagcgtgctggtttaaggatggcctg
aaagtccaggagagtgaaaacattcagctgagcgctgagggtccatacaggaggctgacc
attctgtgtgcctccaggagggactcgggagagtatgtgtgcgacacaggagctgactct
gttttcttccagctcaatgtgacagaggctccagtgcgcattgtatccccgagcaaatct
gaagtggaggtgctcctgctggcttcagaaaggctggtgctgagctgtgagatctccaag
gcagaagcagatgtctgctggtactgtgatggcatggaggtagaggagagtgaagagctc
atactggaggaggatggggttcaccgcaggctgatcatacctcgtaccaccatagatgat
tcggcagagtatgtgtgtgaaactgccaatgattctgtgaccttctgggtgaaaatagaa
gagccccctgtaaaactctccacctctaaaaagacagatgacattattcagaatttcgcg
ggggatgctgtggtcctggagctggaggtgtctcgtgaaaatgcagaagtgtgctggatg
aaggatggagtgaagatggaggagagcagcaatatcaccatccacatggatggcctaatt
cgcaaactaatcatccactccccaacactcgcagactctggcctctatacctgcaacgct
atagatgacacaatggatttccaagtcaaaattagtgaggcaccactgaaaatcctgaaa
aaagatgaggttaatacagagtataaggctcagctgtctgatgacgttgtgctggaatgt
gagctgtcaaggccaaatggggaagtgaaatggtacaaaaacaatgatcatattgaggaa
aacgagcgcttctgctttgaggaggaaggtgctttcagatccctggtcatcctctgtgca
gagctggaggattctggggaatatatccttgatgcaaaagatgacagcatttcctttcat
gtcactgtgcaagagcctcctgtgaaggttctaggaaactctggtcagtctgatgtccag
gaaatggtggaaggtgatgatctggtcctggcatgtgaggtgtcacgagcgaatgcacct
gttcagtggctctttaacgagaaacctctgcttcctgactcccgcacgtacatcgagagc
tatggcacactacgcaaactcataatatctaatatccagccctctaactccggaaaatac
acgtgtgacgctgttgatgacaaaatgatgactttagttaaagttcaggagcctcctgtt
gagttccttgacaaagaagatgtgatcatggttacgggttatgaggcagagagcatcact
ctgacagccatggtgtccagacacaatgccccagtgcgctggctcaaggactggacgtca
gtcagtggggaacgctttcacgcagacagtcaaggcctgacccgcactctctccatcaac
cctcttaagaggtcagatagcggagagtacacatgtgatgccaacacagatgagctacgc
ttcagtctgctggtcaaagaaatgcgcatcaagtttgtgaaaccgctgtttgacactgtg
gcccataaggatggcatgattactctgcgctgtgaggtctgtaagcccaaagctgatgtg
cagtggttaaaggacggtgttgagataatccccagccgccgtttctccatccgggctgat
ggcacggagagaagtctcaccatccaccgcatcaccaaagaggacgcaggagagtacgct
tgcgaatccagggatgattacaccagtgcaaagatcaaggtggagatgccccgtgtggtg
gagtttctcactgagctccacaacactacagtgatggaaggtgaagaggccacctttaag
tgtgtggtgtctcctgacgatgttcagatggtctggttcatggatggagagatcatcaaa
cccagtgagcgttttatcatcgagcagaatggcctgtgtcacacgctgatcatccgtagt
gtccagctcctggactcctccaggatcacagcagaggctgagggagtcatctcaaaagcc
agcctgaaggtccaggaggctcaggtgttgttcactaagaagatggaagtggtgatggct
gaagagttcggagaggctacgctggagacagaggtcagtttggaatcaggggaggtgcag
tggatgcgacagggtgtggtcatccagccgggaccacgacacactctgacccagagcggc
cgcaagagaagcctcaagatcaccaatctcagcctgtctgaccgtggaacctaccgctgc
gagaccctccacgatcgcacacaggtcaaactcaacgtggagcccaggaagatcaccata
tgcaaggggctgatggacatcgagacatttgagagagaaacagcctcatttgagttggag
ctgtcccatgcggacgtggagggcgtgtggcagaaggacggactgagggtcaaacccaac
aacaccatctgggtcagtgccaatggatgtgtgcatagcctcacgctcaccaacctcacc
ctggaggacacaggcaccatcgccttctctgcagatgggctccggacctcagcacggctt
gtggtaaaagagactccagtcgcaatcataaagaagttgtctgatatccggctggaggaa
ggctcacctgtcatgctggagtgtgagctgtccaggcaaaatgtggaagtccgatggctg
aagaatggagtggagcttaagtcagataaaggcttgaggatctactcaatgggtcgtaag
cgctgtctgcagatcatgcagagtagcgtcagtgactctggcctctacacctgcgaaatc
ggtgacctctgcacattctgcaagcttgaaatctatgagcgggagttggagatcatcact
gagttggaggatttgtacattaaggaggaccagaatgctgtcttcatgtgtgaggtgtcc
atggaggacatgcctggagagtggtacaagaatggccatagaatccggcccagcagtacc
atcaagactcgccgagagggtacaaagcacttccttctaatatgcaacgttacaacagag
gatgctggcgagattaaatttgtgtccaaacaagttgaatcggttgcataccttgaggtt
caagaactacctgtgagcattgtgcgtccacttagggaccgcacagcgttggagaagcat
cgggtgatcctggagtgcactgtgtcctcccctcactgtgaggtcacctggtacaaaggc
gatgaggagctggagtcctccgagcgcatggagatcttcagcgagggctgctaccacaaa
ctggtcatccaccaggtggcggtagaggatgagggtacttacaacattgaggtgggcgag
cactcgtccacagccaagcttatggtggaagcccaatccatcatgttggtgaaggagctg
gaagatgtcgaggtgaacgctccagacccagcgcggttccagtgcaaagtgtctgtaccc
cttatcaaacaccccgtctggaccctgaatggagaaaccattcagccagggcccgacatc
cgtctggagaacaaagggaccctctatagtctcaccttcaaaaacaccagctcagatatg
agtgggacagtaaagttcactacagggaaagccaaaagcagtgctaaactgagagtgctg
tag
DBGET
integrated database retrieval system
