Colossoma macropomum (tambaqui): 118808175
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Entry
118808175 CDS
T09004
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118808175 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118808175 (prpf38a)
Spliceosome [BR:
cmao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118808175 (prpf38a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
GIDA
Motif
Other DBs
NCBI-GeneID:
118808175
NCBI-ProteinID:
XP_036426547
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MANRTVKDAKSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGATYMRLTGTSVDCYKYL
EPLYNDYRKIKIQNRNGEFELMHVDEFIDELLHAERVCDVILPRLQKRQVLEEAEQLDPR
ISALEEDLDEVESSEEEDEEEEKPERVQTPEPHRRSYRDMDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERDRDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESR
SKKSHKRSRRGNE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagaacagtaaaagatgcgaagagtatacacggaacaaatccccaatatctt
gtggagaaaattatacgaactcgaatctacgagtctaaatactggaaagaagagtgtttt
ggacttacagctgagcttgttgtggacaaagcaatggagctcaagtttgttggtggagtg
tatggtggaaacatcaagcccacacctttcttatgtttgactctgaagatgctccagatt
cagcctgagaaggacatcattgtagaattcatcaaaaatgaagatttcaaatatgtccgc
ttgcttggagcaacgtatatgcgtctgacaggcacatctgtggactgctataagtatttg
gagcccttgtataatgactacagaaaaatcaaaatccagaatagaaatggagaatttgag
ctaatgcatgtggatgagttcatcgatgagctgcttcatgcagagcgagtgtgtgacgtc
attctcccaaggcttcagaagaggcaagttctggaggaagctgagcagttagatcctcgt
atcagtgcccttgaagaagacctggatgaggtggagtccagtgaagaagaagacgaagag
gaggagaagccggagcgagtacagacaccggagccacacagacgcagttacagagatatg
gaccgccctcgcaggtctccctctccacgctacagacgcagccgctcacctagaagacga
agcagatcacccaagagacgaagcccatccccaagacgtgagcgggaccgggatcgccac
cgcagcaagagtccccgtagacaccgcagcaggtccagagacaggaggcatcgctccaaa
tctccaggtcaccacagaagccacaggcatcgcagccactcaaagtctccagaaagtcga
tcaaagaagagccacaaaaggagtcgaagaggaaatgagtga
DBGET
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