Colossoma macropomum (tambaqui): 118808205
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Entry
118808205 CDS
T09004
Symbol
chd1l
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118808205 (chd1l)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118808205 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
LIG3_BRCT
AAA_22
SWI2_SNF2
Mis12
DUF6040
Motif
Other DBs
NCBI-GeneID:
118808205
NCBI-ProteinID:
XP_036426586
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MSRFLRAVKSNILDKDKSELSEKDLKTWGLKGIHLRPYQLHGVQWLCECLKHLEGCILGD
EMGLGKTCQTISLLVYARGCLGMKGPFLVLCPLSVLENWRQELERICPSLSVVCYTGDKE
RRAELQREMMGDKDFHVLLTTYEMCLKDASDLRRWKWEILVVDEAHRLKNQKSLLHQTLS
EFSVGFRVLLTGTPIQNNLQEVYSLLSFIQPSLFPCDATEEFVSAYSDVQTEHTLAEELH
QVLQPFLLRRVKSEVAAELPKKTELVVYHGMSTLQKKYYKAILMKDLDAFGSDQGSKTRL
LNILVQLRKCVNHPYLFDGVEPEPFEMGEHLVEASGKLSLLDTMLAYLLEGGHRVLLFSQ
MTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTKDVFIFLLSTRAGGVGMNLT
AADTVIFVDSDFNPQNDLQAAARAHRIGQTRAVKVIRLLGRDTVEEIIYSRAVSKLRLTS
AVIEEGRFSLLEQPQAAASALQLSEILKFGVDNLLSTEESSIQDVDLKLILGPSRKGHWL
MDEELVRPNKEDEDEDEDEGQHHMYYFEGRDYSKDPSTEDQKTFELLLEEQLAQLEDIGK
EGRTLRHKTGIVLSGPLATPAKRKRPLTESELEQRRQKRQEAAAKRAKLQEEKRRQREEQ
KYKKKTAWWASCGYKSLCLPSADSEGEDVDEDEGDDSSVNSTDSEHTAIRYILGDVTHPQ
ADREDAIIVHCVDDAGRWGRGGLFTALEVRSDEAKKQYELAGDMEDLDLGNVLLFPIDDK
QSRLSGRDHLALIVAQQRDKANNPSGIRLTALEEGLKKIYRAAKQKKASVHLPRIGHSTK
GFNWYGTERLIRKHLASRGVPTFIYYYKRTTSHSTIKASSTSTAGSSTSCSASARPASTS
PRSSCSLSPTGSGDECREGPSTSAQGEEAFGLADFMRGVHIFFYNMGATEKKKLTRYLVT
YDGDEEDIMNSQVTHVVAEVDSPVHIQELQDLMKQYPKALLVKKKWLESCFANQRKVNAS
KYIHRLK
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggtttcttcgagcggttaagagtaacattctggacaaagacaagtcggaatta
tcagagaaagacttgaaaacatggggacttaaaggaattcatctgcgcccttaccaactg
catggagtgcaatggctctgtgagtgcctgaagcatctggaaggatgcatcctcggtgat
gagatgggcttaggcaagacctgtcagaccatctccttgctggtgtatgctcgaggctgt
cttggcatgaagggtccatttctggtgctttgtcctctgtcggttctggagaactggaga
caggagctggagcgcatctgccccagtctgtctgtggtctgttacactggagataaagaa
aggagggcggagctacagagagaaatgatgggggacaaagatttccatgtcttgctaact
acttatgagatgtgcctaaaagatgcaagcgacttaagaaggtggaaatgggaaattttg
gttgtggatgaggctcacaggctgaagaaccagaaatcactgctccatcaaaccctttca
gaattctctgtgggcttcagagttttgttaacaggaactccaatccaaaacaatctgcag
gaagtctactcccttctcagcttcattcagcccagcctgttcccatgtgatgctacagaa
gaatttgttagtgcttattcagatgtgcagactgagcacactctagctgaagagctccac
caggtgctgcagcccttcctgctgcgcagggtcaagtctgaggtggcggcagagctgccc
aagaagacagaactggtggtttatcatggaatgtccaccctgcagaagaagtactacaaa
gctattctgatgaaagacctggatgcttttgggagtgatcagggcagtaagaccaggctt
ctgaatattctggtgcagctgaggaagtgtgtgaaccacccatacctgtttgatggtgtg
gagccagaaccgtttgagatgggggaacacttggtggaggccagtggaaagctttctctg
ctggacaccatgcttgcatatctgctagaggggggtcaccgtgttctgctgttctctcaa
atgaccagaatgttggatattcttcaagactacctggagtatagaggttacagctatgag
cgtctggacggttcagtgcgaggagaggaacgcaatctggccattaagaacttcagcacc
aaagacgttttcatcttcctcctcagcacccgagctggtggcgttggtatgaacctgaca
gcagccgatactgtaatctttgtggacagtgatttcaatcctcaaaatgacttgcaagca
gcagctcgagcacacaggattggacagacaagggctgtgaaagtgatccggctcctgggt
agggacacggtggaggagatcatttactcacgcgccgtatcgaaactgcgtctcaccagc
gcagtgatcgaagagggccgcttctctctgctggagcagcctcaggccgctgcttctgcc
ctgcagctgagcgagattctaaagtttggagtggataatctactgtcgacagaggagagt
tcaattcaggatgtggaccttaaactgattctgggcccgtctcggaaagggcactggttg
atggatgaagaacttgtgaggccaaataaggaagatgaagatgaggatgaagatgaggga
cagcaccacatgtactactttgaagggagggactactccaaagaccccagcacagaggac
cagaaaacatttgagcttctgctggaggaacagttagcccaactagaggatatcggcaaa
gagggccgtacactgcgccacaaaaccggaattgttttgtctgggcccctggctacccca
gcaaaaagaaagaggcctctgacggagtctgagctggagcagaggcgtcagaagagacag
gaagctgctgctaagagagccaagctacaggaagagaagaggaggcaacgggaagaacaa
aaatacaagaagaagacggcatggtgggcctcatgcgggtataaatccttgtgcttgccc
tctgctgatagcgagggtgaggatgtggatgaagacgaaggtgatgacagcagtgtgaac
tctacagactcagagcacacagccattcgatacatactgggcgatgttacccatcctcag
gctgaccgggaagatgccattattgttcattgtgttgatgacgctggacggtggggccga
ggtgggctttttacagctttggaggtccgatcagatgaggcgaagaaacaatatgaattg
gcaggggacatggaagacttggatcttgggaatgtgctgctatttcccattgatgacaag
cagtcaagactgagtggacgtgaccatctggcactcatcgttgcccagcagagagataaa
gccaacaacccgtcaggcatccgcctcactgccttagaggagggccttaagaagatatac
agggctgccaagcaaaagaaagctagtgtccatcttccgcgaattggccactccaccaaa
ggctttaactggtatggaactgagagattgatccgcaaacacctggcctcccgaggcgtt
cccaccttcatatactactacaagcgaacaacctcacattctaccataaaggcctcttcc
acaagcactgcaggttcatctacttcatgctcggcatcagcccgtccagcatcaacttct
ccacgttcctcctgctccctaagtcctactggttctggagatgagtgccgagagggccct
agtacttcagcccagggtgaagaagcttttggcctggctgatttcatgagaggtgtccat
attttcttttacaatatgggtgccacagaaaaaaagaaactcacgcgctacctcgtcacg
tatgatggtgatgaagaggacattatgaactcacaggttactcacgttgtagcagaagtg
gacagtccagttcatatacaggaattacaggacttgatgaagcaatatcctaaggcgctt
cttgttaagaagaaatggctggagtcttgctttgccaaccaaagaaaagtcaatgcttca
aaatatatccatcgtttgaaatga
DBGET
integrated database retrieval system
