Colossoma macropomum (tambaqui): 118808640
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Entry
118808640 CDS
T09004
Symbol
rad54l
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118808640 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118808640 (rad54l)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118808640 (rad54l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Motif
Other DBs
NCBI-GeneID:
118808640
NCBI-ProteinID:
XP_036427364
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All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MRRSLAPSQLAKRKQREDSSEDEDWDPDTTIKRKKGEKDCRENYISPYRKPLTQLTSRPM
CVDSNEHEAFIRSILSRPFKIPIPNYTGSLGVRALGLRKAGVRKALHDPFEDGALVLYEP
PAISAHDLIKADKDKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRIPGSYGCIMAD
EMGLGKTLQCITLMWTLLRQSPDFKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVHPVAI
DGGSKEEIDKKLVNFMSQHGLRVPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKN
SDNQTYQALNVMNAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFEIPILK
GRDADASDKDRAVGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQKEL
YNLFLKQAKPVESLQHGRISVSSLSSITSLKKLCNHPSLIYEKCVEREEGFAGAMDLFPS
GYSTKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRARKYLYVRL
DGTMSIKKRAKIVERFNSPSNPEFXFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQA
MARVWRDGQRKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELKE
LFALNEDTLSDTHDRFRCRRCVNGRQVRPPPEDSDCTSDLSCWQHCVDKRGLKDPVLQAS
WDASVSFVFHQRSHDDQRGVV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagccttgcaccgagccagcttgccaaaagaaaacaaagagaggattcatca
gaggatgaggactgggatcctgatactacaatcaaaaggaaaaaaggggagaaagactgt
cgagaaaattacatatccccatatagaaaaccactcacacagctcaccagccgacccatg
tgtgtggacagcaatgagcatgaggctttcattcgaagtatcctttcaagaccatttaag
attcccatccctaattacacagggtcattgggggtgcgcgctctgggcctgaggaaggct
ggtgtgagaaaggctcttcatgacccttttgaagacggagctttggttctctatgaacca
cctgctataagcgctcatgatctcatcaaagcagacaaggacaagctgccagtacatgtt
gttgtcgatccagtccttggtaaggtcctacgtccccatcaaagagagggtgtgaagttt
ctatgggagtgtgtgacggggcgtagaattccaggctcatatggctgcataatggcggat
gagatgggtctggggaagactctgcagtgcatcaccttgatgtggaccctgctcagacag
agccctgatttcaagcctgagattgacaaagccattgtggtttctccatccagtttggtc
agaaactggtataacgaagttggaaagtggctgggtggacgtgtgcatcctgtggccatt
gatgggggctccaaggaggaaatagacaagaagcttgtgaactttatgtcccagcatggc
ttgagggttccgactccaattctgataatttcatacgaaacgttccgcctccatgctgag
gttcttcacaaaggcaaagttggactggtcatttgtgatgagggtcacaggttgaagaac
tcggataatcagacataccaggccctgaatgtgatgaatgctcaacggcgagttctcatc
tctggcacgccaattcagaacgatctactggagtacttcagcctggtgcactttgtcaac
gctggtatcctcggcacagctcaggagttcaagaagcggtttgagattcccatcttgaag
ggccgggatgcagacgctagtgataaagaccgagctgttggggaggagaaactgaaagaa
ctcattagtatcgtgaacaggtgcttgatccgaaggacttccgacattctttccaagtat
cttcctgtcaagattgagcaagttgtttgctgcaggctgactcctctgcagaaggagctg
tataatctcttcctgaagcaggccaagcccgtggagagtctgcagcacggcaggatcagc
gtgtcctcgctgtcctccatcacctcgctcaaaaaactctgcaaccacccttcactgatc
tatgagaagtgtgtggagagagaggaaggcttcgctggagcgatggatcttttcccctca
ggttactccacaaaagccgtagagccgcagctttcagggaagatgttggtgctggattac
atactggccatgaccaggactaccaccagcgataaggtggtgctggtctccaattacaca
cagactctggacttgtttgagaaactctgtcgggcgcggaagtatctgtacgtgagactg
gatggaacaatgtccatcaaaaagagagcaaagattgttgagcgatttaatagtccctcc
aatccagagtttnatttcatgttaagcagcaaagctggtgggtgtggcctaaatttaatt
ggagcaaatcggctggtgatgtttgacccggactggaatccagccaatgacgagcaggcg
atggcgcgagtgtggcgggatggccagagaaagacatgctacatctacagactgctttcg
acaggcaccattgaggagaagatcctgcagaggcaggcacataagaaggccctgagcagc
tgtgtggtggatgaggagcaggatgtagagaggcacttctctctgggggagctgaaagag
ctgtttgctctcaatgaggacacgctcagcgacacacacgacaggtttcgttgccggcgg
tgtgttaacggccgtcaggttcgcccccctcctgaggattcggactgcaccagtgatctg
tcctgctggcagcactgtgtggacaaacgcgggctgaaggaccctgtgctgcaggccagc
tgggatgccagtgtctcctttgtcttccaccagcgctctcacgatgatcagagaggagtc
gtctga
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