Colossoma macropomum (tambaqui): 118808825
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Entry
118808825 CDS
T09004
Symbol
eme1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03440
Homologous recombination
cmao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118808825 (eme1)
03460 Fanconi anemia pathway
118808825 (eme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118808825 (eme1)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118808825 (eme1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
118808825
NCBI-ProteinID:
XP_036427591
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MMGSSSRAGFQISDNDSSDSEELPIIDFSQRRNTQEELKQDLVVLDGSDSEMDHPVSSCA
RHPTTGAADVLMVSSESEEEEAFIPLSVRLRQKQANMATATVMRESQTSSANHNGDKPSP
AMNTHHIPVVQPADHLREYSDNISHQSSDYDATCVSKDPLPRGENLRKGKRTPADIEAAK
EEALRRRAEREKQQGERERLRAEKKALADAVKAMRPEECLKNMVVTVDPGLLQLEGGGAL
LTSLHAMGCSCAIEKQPLPRSVSWVRRAPCPQTGELMSIPESHTVIQVPVEDFISMVHNY
TQEQRCGRTPDCGISLTSWTLRLMARNPGRNLSLVVIDIEKYFKSQNAKSRQKFRDAVLG
DGGVKKRKRKDAEEHPSVSRVEMEEALVDLQLHTGVQVLFHSTWNGFTDYVTMSTKAVAE
APFKREREKTGFSFCLESEWAGGQKVDRTGKGLLQVWKRQIQQLNRVSPDIASAILNAYP
SPQLLIQAYHQCKSEHEKVTLLSDVLIRRGEGVTSTTRRVGPELSKRLFLLLTSADPQRT
LDSMV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtagcagcagcagagcaggattccagatcagtgacaatgactccagtgactcg
gaggagctgcctataattgatttctcacaacgtaggaacacacaggaagaactaaaacag
gacctggtggttttggacggctctgactctgagatggatcacccggtctcatcctgtgca
cgtcacccgacgactggagctgccgatgtgctcatggtcagcagtgagagtgaggaggag
gaggcttttattcctctgtctgtgagacttagacagaaacaggcgaacatggctacagcc
acagtcatgcgtgagagtcagacgtcatctgctaatcataatggagataagccgtcacct
gccatgaacacccatcatatccctgtagttcaaccagcagatcatcttagggaatattca
gataacattagtcaccagagcagtgattatgacgcaacatgtgtttcaaaagaccccctg
ccaagaggggagaatctgcgaaagggcaagagaacccctgcggacattgaggcggccaaa
gaggaagccctgaggaggagagcagagcgagagaagcagcagggagagcgagagaggctg
agagcagagaagaaagcgctggcggatgctgtgaaggccatgagaccagaggaatgcctc
aaaaacatggtggtgactgtagatccaggcctgctgcagctggagggtggcggagctctc
ctgacttccctgcatgctatgggctgcagctgtgccattgagaaacagcctctcccccgc
agtgtctcctgggtcagacgtgcgccctgccctcagactggtgaactgatgtctattccc
gaatcacatacagtgatccaagtcccagtggaagacttcatcagcatggttcacaactac
acacaagagcaaaggtgtggacgaacacccgactgcggcatatccctgacttcttggact
cttcgtctcatggccagaaacccaggcagaaatctcagtctggtggtgattgacatagag
aagtattttaaaagtcagaatgctaagagccgtcagaagttccgtgatgcggtgctgggt
gatggcggcgtgaaaaagaggaagcggaaagatgcggaggagcatcccagtgtgtctcgt
gtagagatggaggaggctttagttgacctgcagctgcacactggggtccaggtcctcttt
cactcgacctggaatggcttcactgattatgttactatgtcaaccaaggcagtagctgaa
gcaccattcaagcgggagcgggagaagacaggctttagtttttgtctggagagtgagtgg
gcaggtggtcagaaggtggaccggacaggaaaaggccttctgcaggtgtggaaaaggcag
atccagcagctgaaccgggtcagcccagacatagccagcgctatactaaatgcatacccc
tcccctcagcttcttattcaggcataccatcagtgcaaatcggagcatgaaaaagtcaca
ctgctgtcagacgtgctgattcgccggggggagggggtgacgtcaacgacccgtagggtt
ggaccagagctgtccaaaagactctttctgctgttgacctcagcagacccccagcggact
cttgattccatggtgtaa
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