Colossoma macropomum (tambaqui): 118808871
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Entry
118808871 CDS
T09004
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 1B-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmao03016
]
118808871
Transfer RNA biogenesis [BR:
cmao03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
118808871
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_19
CFAP70_TPR_C
TPR_Psidin_N
TPR_17
TPR_16
TPR_11
TPR_Slam
TPR_15
TPR_10
ANAPC3
CFAP70_mid_TPR
TPR_20
TPR_YpiA_C
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
118808871
NCBI-ProteinID:
XP_036427644
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MTQAKHLETELQQLECHFTWELKKQDTDITDLLNRLEENVKINLGGKAGVAQTYNSLAFV
KYLLGFPTEALSNLQKSVELTKEYRENDCDKWLIVTYGNLAWLQYHMKCYAECESYLEKL
RDIAERFPAEPASALHHEVLGEKAWALFKFSRENYETATECFRKALELEPNEGEWNAGYA
IVLYRTETEPSNPTDSPTIKQLRRAIETKPDDDVLKVLLALKLATYKKYDEAESLVEKAL
ENSPEDPHVIRYVGKFFRNKGSVDRAIALLKRALERVPNSSFIHHQLALCYNRKKTHLFQ
TRSQRSKSAEIQRLRNQCIYHLEMATTMKSSFIFAMSELALQYGENQHISKAEEQFQTTF
QTAEEKKYGSQVVHFHYAQFQQHRKKCESLAIKHYMECLKMGPDTSEGKRSAGSLKSIAE
RKICRNPKEAFGILGFIHKEKGEKGKAIECYEKALSYEDNEEYLQNLFHLRLSLE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggctaaacatctagaaactgaactgcagcagctggagtgtcatttcacttgg
gagctgaaaaaacaggatacagatatcactgatctcctaaacagactggaagagaatgtc
aagataaatcttggtgggaaagcaggagttgcacaaacatacaactcattagcattcgtg
aagtacctcctagggtttcctacagaagctctcagcaacttacagaaatctgtggagctc
acaaaagagtaccgtgagaatgactgtgacaagtggctcatagtcacctatggaaatctg
gcctggctacagtaccacatgaaatgttatgctgaatgtgaaagctacctggagaagctc
agagacattgctgagagattcccagcagaacccgcttctgctctccatcatgaagtgctt
ggtgaaaaggcctgggctctgttcaaattctctcgagagaactatgaaacagctacagag
tgcttcaggaaggccttggagttggagccaaatgagggtgaatggaatgccggttatgcc
atcgttctgtatcgcacagaaactgagccctccaatccaacagattcacccacaattaag
cagctgagacgagccattgaaactaagccagacgatgatgttcttaaagttctactggct
ctgaaactggccacttacaagaagtacgatgaggctgagagcctagtagagaaagcatta
gagaactctccagaggatccacatgtcattcgatatgttgggaagtttttccggaacaaa
ggctctgtggatagggccatcgctttgttgaagagggcactggaaagggtgcccaactca
agcttcatacatcatcagctagcactctgctacaacagaaagaaaacccatctatttcaa
acacgaagccaacgcagcaagagtgctgaaattcagcggcttcgtaatcagtgcatctac
catttagagatggccaccacaatgaagtcctccttcatttttgctatgagtgagctggct
ctgcaatatggagagaaccaacatatctccaaggcagaggagcagtttcagactacattc
cagacagctgaagaaaaaaaatatggttctcaggtagttcattttcattatgcacaattc
cagcagcacaggaagaaatgtgagtctctggccatcaaacactacatggaatgtctgaag
atgggtccagatacatctgaaggaaagagaagtgctggaagtctgaaaagcattgctgag
agaaaaatctgcagaaatccaaaggaagcctttggaatactgggatttatccataaggaa
aagggagagaaaggcaaggccatagagtgctatgagaaagctttaagctatgaagacaat
gaagagtaccttcaaaatctgtttcatcttagactttctttagaataa
DBGET
integrated database retrieval system
