Colossoma macropomum (tambaqui): 118809459
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Entry
118809459 CDS
T09004
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118809459 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118809459 (dhx8)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118809459 (dhx8)
Spliceosome [BR:
cmao03041
]
Complex C
Other components
Step II factors
118809459 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
T2SSE
PhoH
TsaE
Sigma54_activ_2
Flavi_DEAD
OB_RRP5_4th
ABC_tran
Motif
Other DBs
NCBI-GeneID:
118809459
NCBI-ProteinID:
XP_036428699
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MVDVGEDELKKLEYLSLVSKVCTELDNHLGISDKDLAEFVISLAEKNPTFDGFKSVLLKN
GAEFTDSLISNLLRLIQTMRPPTKASTSKGCEPIVKPKSEKDRLKEMFPALCRPDNPSTR
TMLDEDDVKVAADAMKELEMFMPSACATDSKSSKKRSEAAGSSSKKSRRSRSRSRSRERE
RDRDRDRDRDRDRDRRRRHRSRSRSRSRSPDRERRRRSRWHSRSRSRSPARGDREKGSDR
WKDKHVDRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVAN
VADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNVGGEGQEESAMRNPD
RPTNLNLGHAPEVEDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPK
VDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERRE
VKQAQREAEMDSIPMGLNKHWVDPLPDADGRQIAANMRGIGMMPNDIPEWKKHAFGGNKA
SYGKKTQLSIIEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYT
TRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLR
ECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQY
FYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDT
ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTI
DGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAY
RDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD
DEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALA
DQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR
HKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW
VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEP
NAWRISRAFRRR
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgtcggagaagacgagcttaagaagctcgaatacttgtctttagtgtctaaa
gtttgtactgagcttgataaccacttgggaatcagcgacaaggacctcgctgaatttgtc
atcagtcttgcagagaaaaacccaacatttgatggatttaagtctgtactgcttaaaaat
ggggctgagtttacagactctctcatcagcaatttactccgtctcatccaaactatgcga
ccaccaactaaagcatccacgagtaaagggtgtgagcctattgtcaagccgaagagtgag
aaagacaggttgaaggagatgtttcctgccctttgcagaccagataatcccagcactaga
actatgctagatgaagatgatgtgaaagttgcagctgatgctatgaaagagttggagatg
ttcatgcccagtgcctgtgcgacagactcaaaaagcagcaaaaaaagatctgaagccgct
ggcagcagcagcaagaaaagtcggaggagcaggagtcgcagtcggagcagagagagagag
agagatagagacagagacagagatcgagacagggacagggacaggaggaggcgccaccgc
tctcgttcccgctctagatctcgctctccggatagagaaaggaggcgcaggagccgttgg
cattcccgcagcaggtccaggagccctgcccgaggagacagagagaaaggctctgaccgc
tggaaggacaaacatgtggaccgcccacccccagaggagccgtcagtaggagacatctac
aatggcaaagttaccagcatcatgcagtttggctgctttgttcagctagaggggctgagg
aaacgttgggaagggttggttcacatctctgagcttaggcgagagggcagagtggcaaat
gtggcagatgtggtcagcaaaggtcagagggtgaaggttaaagtgttatccttcacaggc
tctaagaccagccttagcatgaaggatgttgaccaggacacaggtgaagacttgaacccc
aacaggaggaggaatgttgggggagagggtcaagaagaatcagcaatgaggaacccagac
agacccaccaacctcaatctaggtcatgctcctgaggtggaggacgacacgctagaacgc
aagagactcacgaagatctctgatcctgagaagtgggagatcaaacagatgattgctgcc
aatgtcctttccaaagaggagttcccagactttgatgaggaaacagggatcctgcctaaa
gtcgatgatgaagaagatgaggacctagagattgaactggtggaagaagaaccacctttc
ctcagaggacacaccaagcagagcatggatatgagccctgtgaaaatagtgaagaaccct
gatggctctctgtctcaagcagccatgatgcagagtgctctggctaaagagcgacgagaa
gtgaagcaggctcagcgggaggctgagatggactccatccccatgggtcttaacaagcac
tgggtggaccccctgcctgatgctgatggaaggcagattgccgccaacatgaggggcatc
ggcatgatgcccaacgacatccccgagtggaagaaacacgcttttggcggcaacaaggcc
tcatacgggaagaagacacagctgtccatcattgagcagagagagagtctgcccatctac
aagcttaaagagcaactcattcaggctgttcatgataaccagatcctgattgtgattggg
gagacaggctcagggaagaccactcagatcactcagtaccttgctgaggctggatacact
acacgtgggaagattggatgcacacaacccagaagagtggctgccatgtctgtggcaaaa
agagtgtctgaagagtacggatgttgtttgggacaagaggtgggctacaccatccgtttt
gaggactgcacaagtccagagacagtcatcaagtacatgacggatggtatgctgctgaga
gagtgtctgattgaccctgatttgggccagtatgccatcattatgctggacgaggctcac
gaaagaaccatccacactgatgtgctctttgggctgctcaagaagactgtacagaagcgc
acagacatgaagctcattgtgacgtctgctacgctggatgctgtgaaattctcacagtat
ttctacgaagcacccattttcactattcctggccgtacttacccagtagaggtactgtac
actaaagagcctgagacagactacctggatgccagtctgatcacagtcatgcagatccac
ctcactgagccaccaggtgacattctggtgttcttgacgggtcaggaagagattgacaca
gcttgtgagatcctgtacgagcgaatgaaatcccttggccctgatgttccggaattgatc
atcctacctgtatactctgccttgcccagcgagatgcagaccaggatctttgaccctgct
ccacccggcagcagaaaggtggtcattgctacaaacattgctgagacctctctgacaatc
gatgggatctactatgtggtggatccaggatttgtcaagcagaaggtgtacaactccaaa
acaggcattgaccagctggtggtgaccccaatctctcaggcacaggctaagcagcgggca
ggcagagcaggcaggactggacctgggaagtgctacagactgtacacggaacgtgcatac
agagatgagatgctcaccaccaacgtacctgagatccagagaactaacctggccagcact
gtgctatctctcaaggctatgggcattaatgacctgctttcatttgacttcatggacgct
cctcctatggagactctgattacagccatggaacagctgtacacgctaggtgctttggat
gatgagggactgctcactcgtcttggacgcaggatggcagagtttcctctggagcccatg
ttgtgtaagatgcttatcatgtccgtccacttgggctgcagtgaagagatgctgaccatt
gtgtccatgctgtctgtgcagaatgtgttctacaggcccaaggacaaacaggctctggct
gaccagaagaaggccaagttccaccagcctgagggagaccatctgaccctactggctgtg
tacaactcttggaagaacaacaagttctctaatccctggtgctatgaaaacttcattcag
gcgcgctccttgcggcgtgcacaggatatccgtaaacagatgctgggcatcatggaccga
cacaaattggacgtggtatcgtgtggcaaggccacagtgcgtgtgcagaaagcaatctgc
agtggtttcttccgcaatgcagctaaaaaagaccctcaggaaggctacaggacccttata
gaccagcaagtcgtttacattcacccctccagtgccctgtttaaccgacaacctgaatgg
gtggtgtaccatgaattggttttgaccaccaaggagtacatgagggaagtgaccaccatt
gacccgcgctggctggtggaattcgctccagccttcttcaaagtgtcagatccgactcgc
ctcagcaagcagaagaaacagcagcgtctggagcctctctacaaccgctacgaggagcct
aatgcctggagaatctccagagctttccgcaggcgctag
DBGET
integrated database retrieval system
