Colossoma macropomum (tambaqui): 118809580
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Entry
118809580 CDS
T09004
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmao01002
]
118809580 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118809580 (usp42)
Enzymes [BR:
cmao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118809580 (usp42)
Peptidases and inhibitors [BR:
cmao01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118809580 (usp42)
Ubiquitin system [BR:
cmao04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118809580 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
118809580
NCBI-ProteinID:
XP_036428924
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MTIVDKPSEKSDLESVRGKHSSSLTPITSRDMDGSSSSWSVSSSATELSRAKTACMAPSI
GAAVYDSNTVLPTERPKEQVVMSCGDGIALPQKVLFPPERLSLKWTQVHRIGAGLQNLGN
TCFLNSALQCLSYTAPLANYLLSREHSKTCHEPGFCMLCTMQNHVIQVFANSGNVIKPIG
VLNELKRIAKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTLIHQIFGGYLR
SRVKCLNCKAVSDTFDPYLDIALDIKTAQTITKAFEQFVKPEQLDGDNAYKCAKCKKMVQ
ASKRFTIHRSSNVLTVSLKRFANYNGGKIAKDVRYSEYFDMRPFMSQSHGEPQLYCLYAV
LVHSGFSCHAGHYYCYVKASNGQWYQMNDSSVSVSDIRSVLNQQAYLLFYIRSTEQKSGG
DFSHMNRAPGQSSPRPVVTPKINGLQYTSTSFIGPQLPPHMLKSNSYVNGNGSTKEYLNG
SKPSSSFSSGMTKTGSSLSVSSSSTSSSSTSHQLLHPSGISEPPKRPKLTFHIGQGKTAR
PSQTQPSPSFSATSASQAHPQPSSSSLSTSDLQRPVQVNGTPASYSGAAFLVPYSQESSE
ESDQEGGVLDNGIAKPYNIAKAANGKNGMNSALSHSSSLLAPKTSSSNSFSVTHTHENGS
RHVHNAQNGHHKVNGFKHADKATGSIASASSIISSSSSLDAQPRPSVTCSKPVSPDRPLC
PSPVTERTKLLPDPVSHNATHSPGAESATETLAKSTDQTTDAQAALTDCTESVCCPAVES
TIGLSQTNQSILSLRVSVEHAGPHGPKASPEASRHIIGGGKEEMNMSQSDKPGSREGTRL
VEERERDQDRDLDRSHVSATTKDRDRDKERHRHYREREDRSRERYAYGHRLDRSHRAPRE
RSSSRDRHYRERSVDRYWDRYSYYRRDHHYHDKRSRDRDKDRRYQPSAYDARSRFAGHYS
RDGGSSHWRRTTEDGRDRWHYSGEESSSRAKPSPPRSVSPASRHSTRKRSLSDDGKTSEE
HRAKKHKKSKKKNKDKHRTSEKDVSDRNGDSSSRRHKKKKKKKKRRDEERRRTDSHSSHS
SVERDWKAKSTEERRSRKRHRSSDREDSPHSAKRVCTEVRPQLNGHSDNGVSHYNGSVNG
FCHTDTDEQVKYRHLNHISTNSGGKKDSCGGQNGDTGTLCHGVVSAADELANVQ
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaaccatcagagaaatctgaccttgagtcagtacggggcaagcac
tccagctccctgactcccatcacctctagagacatggacggcagcagttccagctggagt
gtaagctcttctgccacagagctctcaagggccaagacagcctgtatggctcccagcatc
ggagcagctgtgtatgacagcaacacagtacttccgactgagagacccaaggagcaagtg
gtgatgtcctgtggggatggcatcgctcttccccagaaggtcctgtttccaccagagcgt
ctcagcttgaagtggacccaagtccatcgtattggagcaggtctccagaacctgggcaac
acatgttttctcaattctgctcttcagtgtctttcctacactgctccccttgccaattac
ctgctttccagagagcattccaaaacatgtcacgagccagggttctgcatgttgtgtaca
atgcaaaaccatgttatccaggtgtttgccaactctggaaatgtcatcaaacccattggt
gtgttaaatgaacttaaacggattgcaaagcattttcgttttgggagtcaagaagatgca
catgagttcttgcggtacacagtggatgctatgcaaaagtcctgcctgcctggaaataaa
ctggacaggcaaacacaggcaaccactctcatccatcagatatttggaggctatctgagg
tccagagtgaagtgtctgaattgcaaagcggtgtcagatacatttgatccttatttggat
attgcactcgacattaagactgcccagactattaccaaagcttttgagcagtttgttaag
cctgagcagcttgatggggacaatgcctacaagtgcgccaaatgtaagaagatggttcaa
gcttcaaaaaggttcaccattcaccgcagctccaatgtgctcactgtctcgctaaagcgc
tttgctaactacaatggaggcaaaattgccaaggatgtgagatactctgagtatttcgac
atgcgcccattcatgtcccagtcccatggggagccacagttgtactgtctgtacgctgtg
ctggtacactcaggctttagctgccatgctggacactactactgttatgtaaaggctagt
aacgggcagtggtatcagatgaatgattcatcagtgtctgtcagtgacataagatcggtg
ctgaatcagcaggcatacttgctgttctatatcaggtcaacagagcagaaaagtggcgga
gattttagccacatgaatcgtgctccaggccagtcatcccctcgcccagttgtaacaccc
aagataaatgggcttcagtatacctccacatccttcattgggccacagcttcctcctcac
atgttaaagagtaactcctatgtcaatgggaacggctccacgaaggagtacctcaatggc
tccaagccaagcagcagtttcagcagcggcatgaccaaaacaggctccagtctgtctgtc
tcttcttcttctacgtcctcttcctccacatcgcatcagcttctccatccctcgggcatc
tctgagccaccaaagaggcccaagctgacctttcacattggccagggaaagacagcacga
cccagccaaacccagccaagccctagcttttctgcgacctcagcttctcaagctcaccca
cagccctcatcttcatcactgtctacctcagacctccagcgccctgtgcaggtaaacggt
acacctgccagttacagtggagcagctttcctggttccctacagccaggagtcatccgag
gagtccgaccaggagggtggagttttggacaatggtatcgctaagccttacaacattgcc
aaggcagccaatgggaagaatgggatgaatagtgccctttcccatagctctagcttgctt
gcccccaaaaccagcagctctaacagcttctctgtgacacacacgcatgaaaatggatca
agacatgttcacaatgctcagaatggacatcacaaagtcaatggcttcaaacatgctgat
aaggctacaggaagtatagcttctgcatcttccattatcagctcttctagcagtttggac
gcccagcccagacccagtgtgacatgctccaagcctgtgagtcctgatcgccccctctgt
ccttcaccagtcactgaaaggactaaactgctgcctgaccctgtttctcataatgccaca
cactcacctggtgccgaatctgccacggagacactggctaagtccacagatcaaactact
gacgcccaggcagccttaacagactgtacagagtcggtttgctgccctgcagtggagagc
accatagggctctctcagaccaaccagtccattcttagcctgcgagtgagcgttgaacat
gcaggtccacatgggccaaaggcgtcaccagaggcttccaggcacattattgggggaggc
aaagaagagatgaatatgtctcagtcagacaagcctggctctcgagaaggaacgagactg
gttgaggagagagagagggatcaagatagagatttggaccggtctcatgtttctgctacc
acaaaggacagagatcgagacaaggagaggcaccgacattacagagagcgtgaggacagg
agcagagagcgatatgcatatggccatcggctggacagaagccaccgtgcacccagggag
cgctcgtccagtcgagataggcactaccgagaacgatcagtagatagatactgggacaga
tattcttactaccgccgagaccaccactaccacgacaaaagaagcagggatcgagacaag
gacaggaggtaccagcccagtgcctatgatgctcggtctcgcttcgctggccattactcc
cgggacgggggctctagccactggcgccgcactacagaggacggtcgcgacaggtggcac
tacagtggcgaggagagtagctctagagcaaagccctcacccccccgctcagtcagcccg
gcctccagacactccaccagaaaacgcagcctgtcggatgatggcaaaacgtccgaggag
cacagggccaagaaacacaagaagtcaaagaaaaagaacaaagacaagcacaggacttca
gaaaaggatgtgtctgacaggaatggggacagcagctccaggcgccacaaaaaaaagaaa
aagaaaaagaagaggagggatgaggagaggaggcgcactgacagccactcctcccacagc
tcagtcgagcgtgactggaaggccaagagcacagaggagagaaggagccgcaagcgccac
cgcagctctgaccgagaggactctcctcacagcgcgaagcgcgtttgcactgaggtccgc
ccacaactcaatggtcattcagataatggcgttagccattacaatggaagtgttaatgga
ttctgtcatactgacacggatgagcaagtgaaatacagacatttgaaccacatttccact
aatagtggtgggaagaaagactcatgtggaggacaaaatggagacactgggaccctgtgc
cacggagttgtttctgctgcagatgagctcgcaaatgttcagtaa
DBGET
integrated database retrieval system
