Colossoma macropomum (tambaqui): 118809683
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Entry
118809683 CDS
T09004
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118809683 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118809683 (smarcd2)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118809683 (smarcd2)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118809683 (smarcd2)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118809683 (smarcd2)
PBAF complex
118809683 (smarcd2)
GBAF(ncBAF) complex
118809683 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
118809683
NCBI-ProteinID:
XP_036429099
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MASRAGFLPNSPAGPGGANPGAAGPPGGVRIAGMPPSAGGYRGLPSPAGQYPRPGMPPSR
SMPMGGMGPMGSPMPGPSYGSGMPGRPGMPQSSLDPARKRLLQQQAGGLMGPRRGIKRRK
MADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLRIYIS
NTCTPAKPEGEEAEKVASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKELYGPDNHL
VEWHRMPTTQETDGFQVKRPGDVSVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASI
MQALWLYIKNNKLQDCHEKEYINCNRYFRQIFACPRMRFSEIPMKLAGLLQHPDPIVINH
IISVDPNDQKKTACFDIDVEVDDPLKSQMTSFLSSTTNQQEIAALEMKIHETIESINQLK
TQRDFMLSFSTNPQDFIQDWLKSQSRDLKLMTDTAGNPEEERRSEFYQAPWVQEAVGRYV
FSKVQQRRQELEQVLGIRLT
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagagcggggtttctcccgaacagccccgctggccccggcggcgcgaacccc
ggcgccgcgggtccaccaggcggagtgcggatagcggggatgccaccgagcgcggggggc
taccggggtctccccagccccgccggacagtacccgcgcccaggcatgccacccagccga
agcatgcccatgggtgggatggggccaatgggttcccccatgcccgggccatcctacgga
agcggcatgcccggtcgccccggcatgcctcagtcgtcgctggacccggcccgcaagaga
ctgctccaacagcaagcaggggggctgatgggaccccggagagggattaaaagacgcaag
atggctgacaaagtcctcccacagaggattcgagacctggttccagagtcacaggcttac
atggacctcttggcatttgagaggaagctggaccagacaatcgcccgcaagcgcatggag
atccaggaggccatcaagaagcccatcacgcaaaagcgcaagctgaggatctacatctcc
aacacctgcacacctgccaagccagagggggaggaggctgagaaggtggcatcgtgggaa
cttagagtggagggcaaactgctagatgatcctgggaaacagaagagaaagttctcatcc
ttcttcaaaagcttggtcatcgaactggataaagaactctatgggccagacaatcatttg
gtagagtggcacaggatgcccaccactcaggagacggatggctttcaggtgaagagacct
ggtgatgtcagtgtgaaatgcaccctcctcctcatgctagaccaccagccaccgcagtat
aagttggacccacggctggcccggctcctgggggtccacacccagaccagagcaagcatc
atgcaggcactctggctctacatcaagaacaacaagctgcaggactgccacgagaaagaa
tacatcaactgcaaccgctacttcagacagatttttgcctgccctcggatgaggttctct
gagatccccatgaagctggctgggctcctgcagcaccccgaccccatcgtcatcaaccac
atcatcagcgtggaccccaacgaccagaagaagacagcctgcttcgacattgacgttgaa
gtggacgacccactgaaaagccagatgaccagcttcctttcctctaccaccaaccagcag
gagatcgctgccttggagatgaagatccacgagaccatcgagtccataaaccagctgaag
actcagagagacttcatgctgagcttcagcaccaacccccaggacttcatccaggactgg
ctcaagtctcaaagccgagacctcaagctgatgacggacactgccgggaaccctgaggag
gagaggaggagcgagttctaccaggctccctgggtccaagaggctgtgggtcgttacgta
ttctccaaggtccagcagagaaggcaggagctggagcaggtactgggcattcgcctcacc
taa
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