Colossoma macropomum (tambaqui): 118810265
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Entry
118810265 CDS
T09004
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04080
Neuroactive ligand-receptor interaction
cmao04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118810265 (gabrb1)
04082 Neuroactive ligand signaling
118810265 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmao04040
]
118810265 (gabrb1)
Ion channels [BR:
cmao04040
]
Ligand-gated channels
GABA-A
118810265 (gabrb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
118810265
NCBI-ProteinID:
XP_036429791
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All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MRASGDRWRAGVACLPVLMALALGRSPVAHSGNEPSNMSYVKVTVDKLLKGYDIRLRPDF
GGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQL
WVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT
LEIESYGYTTDDIEFYWQEGSSVTGVDNIELPQFSIIDYKTLSKKVVFATGSYPRLSLSF
KLKRNIGYFILQTYMPSNLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNEKSRLE
SNKVQVVDAHGNIPLTNLDLRLTGAEMLGSLGDPRNTMFSYDSASIQYRKPLTGRDLYGR
PTASLERPITHKKSRLRRRASQLKVKIPDLTDVNAIDKWSRVIFPITYTFFNLVYWLYYV
H
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgagcggagaccggtggcgcgcgggggtcgcgtgcctcccggtgttgatggct
ttggcgctcggccgcagcccggtggcgcacagcgggaacgagcccagcaacatgtcgtat
gtgaaagtcacggtggacaaactgctcaaaggctacgacatccggctcaggcccgatttt
ggaggtcctccggtggatgtggggatgagtatcgacatctccagcatcgacatggtgtcc
gaagtgaacatggattacaccataaccatgtatttccagcagtcatggcgcgataagcgt
ctgtcctacacagggattcctctcaatttgacgctggacaaccgtgtagccgatcagctt
tgggtgccggacacttacttcataaacgacaagaaatcctttgttcatggggtcactgtg
aaaaaccgcatgattcgcctgcatccagatggaaccgtgctctatggcctcaggataacc
acaaccgcagcctgcatgatggacctgcgcagataccctctggatgaacagaactgcacc
ctggagatcgagagctatggctacaccacagatgacattgagttttactggcaggagggg
agttcagtaacaggagtggacaacattgagctgccacagttttccatcatcgactataaa
actttatctaagaaggtggtatttgccacaggctcgtaccctcgtctgtctctgagtttt
aagctgaagaggaacatcggatatttcatcctccaaacctacatgccatcaaacctgatc
accatcctgtcctgggtctccttctggatcaactatgatgcctctgcagcacgggtagct
ctaggaatcaccactgtgctgaccatgactaccatcaacactcatctgcgggagacactt
cctaagatcccctatgtaaaggccatagatatctacctaatgggctgcttcgtctttgtc
ttcttggccctgcttgaatacgcctttgtcaactacattttttttggccgaggcccacac
ctacagaagaaggtggcggagaaagctgctaagagcaacaatgagaagagcaggctggaa
agtaacaaagtccaggtggtcgacgcccatgggaacattccgctcaccaatctcgatctg
cgcctcaccggtgctgagatgctgggcagtcttggagaccctcggaataccatgttttct
tacgacagcgcgagcatccagtaccgcaagcccctgacaggtcgtgacctgtatggccgg
cccactgcttccctcgagcggccgatcacgcacaagaaaagccgcttgaggaggcgagcc
tctcagcttaaggtgaaaattccagacctgacggacgtgaatgctattgacaagtggtcc
cgtgtcatcttccccatcacctacaccttcttcaacctggtgtactggctttactatgtc
cactag
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