Colossoma macropomum (tambaqui): 118810280
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Entry
118810280 CDS
T09004
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118810280 (lingo2b)
Membrane trafficking [BR:
cmao04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
118810280 (lingo2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
V-set
LRR_9
LRRNT
LRR_LRWD1
Ig_6
Ig_C17orf99
Herpes_gE
Motif
Other DBs
NCBI-GeneID:
118810280
NCBI-ProteinID:
XP_036429805
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MLFSLFSCAVGFSLLPLVLFPCPAQACPARCECSVPTRSVSCHRKRLAQVPEGIPIETRV
LDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPGSFRAQPRLRTLRLRANQLTLLP
RGALAGLGELTLLDVSQNRLVILLDYGFEEQRRLRVLELADNELVFIAPRAFSGLPALRS
LTLQRCNLSAVPGHALAHLHGLTSLRLRELNISELPPHAFKGLGRLRYLEVDHWPSLEGV
PSPALQGLNLSSLFITHTNLLAAPSLSHLPYLTHLNLSYSRLRVLPAGWLRGMDRLEVVR
VRQAQLNRVEPQAFQGALSLRLLDLCHNRLATLERAVLPTSMALQSLLIGQNPLVCDCRL
RWLLQRTPPLLYGDVEPQCSAPTALAGKPFGSIMEPLLSRYVICTKPRVISMSTHPTQAE
EGQRAWLYCAAEGAPSPSVSWLTPHRRHITTKSTGRVVAHGNGSLEFRVAEPQDSGVYVC
VASNPAGNATLSITLAVKSLGIRDGALYANRSFLFDPDYNSSLINGTERYTIRMVLDFTT
ILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKGANSELTETSGPR
RVNMKMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctctttgttctcctgcgccgtggggttctccctcctgccgctcgtcctgttt
ccgtgccctgcccaggcctgccccgcccgttgtgagtgctccgtgccaacgcgctccgtc
tcgtgccaccgcaagcggctggcacaggtgcccgagggcatccccattgagacgagggtg
ctggatctgagcaagaaccgcctacgcatcgtcactccgcagaacttctcctcgctgctg
ctgctggaggagctggatctgagtaacaacttgctgtcgtcagtggaacctggcagcttc
cgggcgcagcctcgccttcgcacgctgcgcctgcgtgctaaccagctgactctgctgcca
cggggtgctctggccggcctgggtgagttgaccctgctggacgtgagccagaaccggcta
gtcatcctactggactacggctttgaagagcagcggcggctgcgtgtgctagagctagct
gacaacgagctggtgttcatcgcgccacgggccttcagcggccttccagccctgcgctcg
ctcaccctgcaacgctgcaacctgagtgctgtacctggccatgccttggcccacctgcat
ggtctgaccagtctgcgcttgcgagagctgaacatcagtgagttgccaccgcatgccttc
aagggtctaggccgcctgcgctacctggaggttgatcactggccatccctggagggggta
cccagcccggccttgcaggggctcaacctgagctcacttttcatcactcacaccaacctg
ttggcagcaccatccctgagccacctgccctacctaacccacctcaacctgtcgtacagc
cgcctgagggtgctaccagccgggtggctccgtgggatggaccggctggaggtggtgcgc
gtgcgccaggcacagttaaatcgtgtggagcctcaggccttccagggggcgctgtccttg
cgtcttcttgacctctgccacaaccgcctggcaacactggaacgggctgtcctgcccact
tctatggccttgcagagtctcctgattggtcagaaccccttggtgtgtgactgccgtctt
cgctggttgctgcaaaggactccaccccttctgtatggagatgtggagcctcagtgcagt
gcccccactgccctggctggtaaacccttcggcagcataatggaaccactgctttctcgc
tacgtcatctgcaccaagccaagggtcatttccatgtccacacacccaacccaggctgag
gagggccagagggcctggctgtactgtgcagcagaaggagccccatccccttctgtctct
tggctgacgccacacaggcgccacatcaccactaagagcacaggcagggtagtcgcccat
ggcaacggctcactggagttccgggtggctgagccccaggacagcggcgtttatgtatgt
gtggcatccaacccagcaggtaacgccactctatctataacgttggctgtcaaaagcctg
ggcatcagggacggcgccctctatgccaaccgcagcttcctttttgaccccgattacaac
agctccctcatcaacggcacagagcgctacaccatccggatggtgctggacttcaccacc
atcctggtctccacagccatgggctgcctcagcttcctaggcgtggtcctcttctgcttt
ttgctgctgtttgcctggagccggggcaaaggcaagcacagaggcagcgtggacattcag
tatgtcccccgcaagaggaaaggagccaacagcgagctcacagagaccagtggccccaga
cgggtcaacatgaagatgatctaa
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