Colossoma macropomum (tambaqui): 118810529
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Entry
118810529 CDS
T09004
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 1
Organism
cmao
Colossoma macropomum (tambaqui)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-C2H2_15
zf-C2H2_11
zf-C2HE
Zn_ribbon_19
zf-C2H2_8
C1_1
DUF5339
DUF7129
Motif
Other DBs
NCBI-GeneID:
118810529
NCBI-ProteinID:
XP_036430249
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MEDDGGFQTQFASVMENVLKAAVGEATKLFERTLQQLRAELVHLRQENVDLKTGAFARQF
KTTLAGEGAQRTDQTAGPPRRDVGVQCEKPLMVERCCSPAPFGLQLDIASDGLADLCSTA
ADDGNRQLALLLIKKEPQETDCDDYAPGYFLLKQEGAEPILVRKEPFKNTMERVTIPSTF
QTVTRCYGNPREISTASTSSTTNPAPTTNTVSCSNRVDYSNNKVTQTTSTSTFKGLASLS
ETERQKTSPSAMISNLPELPASSTQLSLPAVSLPAPAISLSRKQGQMSTPRAHLTAPPVS
SQTNQLSEPHVQLKTSQPPQIVQNIQHPCAVARLPHPQHQNLDSCSSVQSLQTPVVTAKK
RVLPASVDQTVRPIARSSPQAKQLSIPPVESFIPRVRSKTALSRFSGPRAQLPFPLDQCT
APIPLSQITSPPNPVPNPPVQDPLSPGQGPVQTIQGQLPPAQGPIQPIQGPLPLGQGPVL
PIQGALPPGQGPVLPVQGPLPPGQGPVLTVQGPLPPGQSPVLPIQAPLPPGQSPVLPVHT
PLPPGQGPVLSVQGPVPPCQVPVSPLKGAVPPIHVPVPPAHAPVPPTQSNEILPPHSQSL
NLQAHFPSVPLHNLAPSSQSSYPPTHIPFTQSYIPVQSMKSSVSPVSIPQTNAPSPLEQM
PVTTPHYLPGPLCSSSDQFFPPPDNTSDLLQPLPPMPFHSPIVLTQQEAALEQPSMIHSQ
SSGQPLQLAPLLTPKEQQAAACNQGNVSKRGPTVPIEIPISTGSSFEETIQRFPPCSSPT
ISCEGNESIPMDMHDEDSIANDASSSPALMPGMSERFKVLSKPESNFRVLDSTKEQQPFR
LNMVKGPQIGNEVSKQNQTKSGTIGQVWESADSSCALPHSALSAPAPDVGRAVPKASRRV
LEKNTECSECGRILSNASSLENHMRLHRGERPYNCSQCGKAFPSVRGLNRHVKVHAEEKG
YKCEECGRSFVYQFTLTKHKLIHSGDRPFPCKICGKKFLAKTDRATHMRMHTGEKPFFCG
QCGKTFKHRVALNMHVQGHRGEKRYVCPHCEKGFVDLGNFKRHKRIHTGEKPFECKECGK
RFTQSAHLKKHLNTQHAASKPK
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgacggtgggtttcagacccagttcgcctcagtgatggagaacgtgctgaag
gcggccgtcggcgaggccaccaagctgttcgagcgcactctgcagcagctgagagccgag
ctcgtccacttgaggcaggagaatgtggacttaaagaccggcgcttttgctcgccaattc
aagacaacactcgccggagaaggagcgcagaggactgatcagacagcaggaccacccaga
cgtgatgttggtgtacagtgtgaaaagcccctcatggtggaaagatgctgcagcccagcc
ccatttggccttcagctagatatcgcaagtgatggtcttgcagatttgtgttccactgct
gcagacgatggaaacagacagcttgctttgctgctcattaaaaaagaacctcaggagact
gactgtgatgactatgcacctggatactttttactgaagcaagagggtgctgagccaata
ctggtgcgcaaggagccctttaagaacaccatggaaagagttacgatcccctcaacattc
caaacagtgaccagatgctatggaaatcccagagaaatatcaactgctagtacatcctca
accactaatccagccccaaccactaatacagtctcctgtagcaatagagtggactactct
aataacaaagttacccagactacaagtacatctactttcaaaggtttggcttcgctgagt
gaaacagaaagacaaaaaacctctccatcagctatgatatcaaatttaccagagctacca
gctagttcaactcagctatctcttcctgcagttagcttacctgcaccagcaatctcactg
tctcgcaaacaaggtcagatgtcaacacctagagcccatctaacagccccaccagtttca
tctcaaacaaatcagctctctgagccacatgtccagctcaaaacctcccaacctccacaa
attgttcaaaatatccagcacccttgtgcagtggcaaggctccctcatcctcaacaccag
aatctagactcttgctcttctgtccagtcattacaaactccagttgtaactgcaaagaaa
agagttttaccagcctcagtagaccaaactgtgagaccaatagctcggtcatcccctcag
gcaaagcagctttcaatccctccagtcgaatcatttattcctcgagtcaggagcaagact
gcactaagtcgtttttcgggtcctagagcccagcttccatttcctctagaccagtgcaca
gctcctattccattgtctcagattacatctccaccaaaccctgtcccaaatccacctgtc
caagacccactttcacctggccaaggcccagttcaaaccatccaaggccaacttccacct
gcccaaggtccaattcagcccatccaaggccctcttccacttggccaaggcccagttcta
cccatccaaggtgcgcttccacctggccaaggcccagttctaccagtccaaggcccactt
ccacctggccaaggcccagttctaaccgtccaaggcccacttccacctggccaaagccca
gttctacccatccaagccccacttccacctggtcaaagcccagttctacccgtccacacc
ccacttccacctggccaaggcccagttctatctgtccaaggcccagttccaccttgccaa
gttccagtttcaccactcaaaggtgcagttccacctatccacgttccagttccaccagcc
catgctcctgtaccaccaactcaatcaaatgagatacttccaccgcactcacagagctta
aatctacaagcccattttccttctgtgcctcttcacaatctggccccatcatcccagtca
tcttatcctccgactcacattccatttacccagtcctacattccagtacaatcaatgaag
tcttctgtttctccagtttcaattccacagactaatgctccatcaccactagagcaaatg
ccagttacaacacctcactatctgcctggccctctttgttcatcttcagatcagtttttt
cctccacctgataatacatcagatttacttcagcctttgccccccatgcctttccactca
cccattgtgctaacccagcaggaggctgcattagagcaaccttccatgatccattcacaa
tcatctgggcaacctttacagcttgcaccacttcttaccccgaaagaacagcaagcagca
gcctgcaaccaaggtaatgtgtctaaaagaggacctaccgtgcctatagaaatacccatt
tctacaggtagtagctttgaggaaactatacaaaggtttcccccttgctcaagtccaacc
atcagttgtgagggcaatgaatccatccccatggacatgcatgatgaagactccatagca
aatgatgcgagtagcagtcctgcactaatgcctggaatgagtgaacgttttaaggttctt
tccaagcctgagtcaaatttcagagtgttagattctacaaaagaacaacaacccttcaga
ctgaacatggtgaaaggtccacagataggcaatgaagtcagcaagcagaatcagaccaaa
agtggaacaataggtcaagtttgggaatcagctgattcgtcttgtgcattaccacattca
gctttgagtgctcctgcaccagatgtgggccgcgcggtgccgaaagcttcacgtagagta
ctggagaagaataccgagtgctctgagtgcggtaggattctcagcaatgcgtcttctttg
gagaaccacatgaggctccataggggtgagaggccttataactgctcccaatgcggaaag
gccttccccagtgtccgaggcctcaaccgccatgtaaaagtccacgcagaggagaaaggt
tacaaatgcgaggagtgtggacggagtttcgtttaccaattcacactaacgaaacacaaa
ctcatccactctggagataggcccttcccttgtaaaatatgtggcaagaagttcttggcc
aagacggaccgggccactcatatgcgcatgcatacaggggagaagccgttcttctgtggt
cagtgtgggaagacattcaagcatagagttgcactgaacatgcatgtacaaggacataga
ggtgagaaacgttacgtgtgtccacactgtgagaaaggctttgtggatttgggtaatttt
aagagacacaaacgcatccacacgggggagaagccatttgaatgcaaagagtgtggtaag
cgttttactcagtcagcacacctcaagaaacatctcaacacacaacatgcagcatcaaaa
ccaaaatag
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