Colossoma macropomum (tambaqui): 118810537
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Entry
118810537 CDS
T09004
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118810537 (ssrp1b)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118810537 (ssrp1b)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
118810537 (ssrp1b)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
118810537 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
118810537
NCBI-ProteinID:
XP_036430266
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MSDTLEFNDIYQEVKGSWNDGRLRFSKQTVVYKSSKTGKVDSISVPELSQALWRRVCLGH
GIKLCTSTGHVYKYDGFKDTDFEKISEYFKANYKVELTEKDMCVKGWNWGTAKFNGPLLS
FEVSDSPVFEIPLASVSQCATGKNEVTVEFHQNDDTEVSLMEVRFYVPPTTGDEGADPVE
AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEEVERRFE
GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEKKGMKASDDMYSDSDDDQHDAYLERMKQEGKIREEANDSDDSEAGSD
ESFNPGEEDDDIAEEYDSKASASESSGDDADSEEEKKKKPSKKAKIVKEKKPRKKEKKMK
DSSAPKRPMSAYMLWLNSSRERIKAENPGISVTEISKKAGEMWKQLSKDKKEEWEGKAEE
AKKEYERAMKEYRESGGGTSGSSKKERKKGGKSEKKKKKKPGAGREREKERPAGNDSFKS
REFISSEESSSESDRGKGRKRKGSDVEEEAVSTPPSSEESGSD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacactctggagtttaatgatatttatcaagaggtcaaggggtcctggaatgat
gggcgtctgcgattcagtaagcagacagtggtgtacaaaagcagtaaaacagggaaggtg
gacagtatctctgtcccagagctcagtcaggccctgtggcggagagtctgcttgggtcat
ggcatcaagctctgcaccagcactggacacgtctataaatatgatggcttcaaggacaca
gactttgagaaaatctcagaatacttcaaagccaattacaaagtagagctgaccgagaaa
gacatgtgtgtgaaaggctggaactggggcactgctaaattcaatggccccctgctgtcg
tttgaggtgagtgacagccctgtgtttgagattccgctcgccagcgtatcacagtgtgca
actggaaaaaacgaggtcactgttgagtttcatcagaatgacgacacagaggtgtcactc
atggaagtgcggttttacgtcccacccactacaggagatgaaggggctgaccctgtggag
gcatttgctcagaacgttctttctaaggcagacgtgatccaggctacaggagatgctgtg
tgcatcttcagagagctgcagtgtcttacacccaggggcaggtatgatatccgtatttac
cccaccttcctgcatctgcacggtaagacgtttgactataagatcccttacaccacggtg
ctgcggctcttcctgctcccccacaaagatcagagacagatgttctttgtgatcagtctg
gatcctcccattaaacagggtcaaacccgctatcactttctcatcctgctcttttcaaag
gaagaggacatcaacctcaccctcaacatgagcgaggaggaggtggaaaggcgctttgag
ggaaagctgaataaaaacatgtctggctctctctatgagatggtcagcagggttatgaag
gctctggtcaacaggaagatcacagtacctggaaacttccagggtcactctggggctcaa
tgtattacatgctcctataaggccagctctgggctgctgtatcctctggagagaggcttc
atctatgttcacaagcctccagtccacctgcgctttgaggagatctcttgtgtgaacttt
gcaagaggcactaccaccacacgctcctttgactttgaaattgagaccaaacagggtaac
cagtacactttcagcagtatagagagagaagagtatgggaagctgtttgactttgtcaat
gctaaaaagctcagcatcaagaacagaggcttcaaagagaaaaagggaatgaaggccagc
gatgacatgtacagtgactcagatgatgaccagcatgatgcctacttagagcgcatgaaa
caggagggcaagatccgtgaggaggccaacgacagtgacgactcggaggctggcagcgat
gaatcatttaaccctggagaggaagatgatgacattgcagaagaatatgacagcaaagcc
tcggccagcgagagtagcggtgatgatgcagacagtgaagaagaaaagaagaagaaacca
tctaagaaggccaaaatagtgaaagagaaaaaaccacgcaagaaagagaagaagatgaag
gacagcagcgcccccaagaggccaatgagcgcatacatgctttggctgaactctagtaga
gagcgcatcaaggcagaaaaccctggaatctctgtaacagagatttcaaagaaggcaggc
gagatgtggaagcaactgagcaaagacaagaaggaggagtgggaagggaaagcagaggag
gctaagaaagagtatgagcgagcaatgaaggaatacagagagagtggtggaggcacatca
ggatcctcaaagaaggaaaggaagaagggagggaagagtgagaagaaaaagaagaagaag
cctggggcagggagggagcgagagaaggaaaggccagctgggaacgacagctttaagagt
cgagagttcatctccagtgaagagagttcatctgagtctgaccggggcaaaggacgcaaa
cgcaaaggctcagatgttgaagaggaggcagtcagcactccacccagctcagaggagtca
ggttcagactga
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