Colossoma macropomum (tambaqui): 118810680
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Entry
118810680 CDS
T09004
Symbol
dtx4b
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118810680 (dtx4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118810680 (dtx4b)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118810680 (dtx4b)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118810680 (dtx4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
WWE_5
zf-ANAPC11
zf-RING_Vps41
zf-UDP
PHD
Motif
Other DBs
NCBI-GeneID:
118810680
NCBI-ProteinID:
XP_036430535
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MDTMLLASAAVVWEWLNEHGRWRPYSPAVSHHIEAVIRSDPRGGSVVLGQVDNRLSPYII
DLHSMHQFRQDTGTLRPVRRSFYDPTSAPGQGWLWEWENDAGSWTPYDMEVCIALQAAKD
RQQPWLDLAPLGFCYLVDFQSMTQVNRQTQRRRRIQRRSDIAYPLVSGPLPKASQAWGAG
TGGAAGGMPSGGGSTGGLLGVGVSGSSSSDNGSAIYPSGTLSMSSLAPLGQPCACQQCML
VLSVKANALASHTLGRRPPQMKPPSPKSSLGTLPSLSKTSSMSNSYSQTLPHGLSFNRSL
SQERKNAAAFAHSLSMLTSNTATLSLSSGRPPPPPLPPPPPPSGSSQQPLTVPNCSSTSP
PSVPTATLITVASSTTLCSPTPSPSATVPPQRSTACAAPLPPRASLAGLSRPALQRIAMA
QSRALIASGVPTVPVKNLNGSSPVHPALAGITGILMSAAALPVCLTRPPKLVLHPPPVSK
SDIKPIPGLGHCCRKTTKKQARKGKTPEEVVKRYLQKVRNPPEEDCTICMEALTGPSGYK
GPGVGGVSRAESVGRLAQCGHQYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPG
KMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQSPEHPNPGKPFTARGFPRHCYLPDSEKGR
KVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDPGYLDNVL
EELKAQGITEEDGQQL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatgctactcgcctccgccgcggtggtgtgggaatggctgaacgagcacggg
cgctggcggccctacagcccggccgtgtctcatcacatcgaggcggtgatacgaagcgat
cctcggggcggcagcgtcgtactaggccaagtcgacaaccgcctctcgccctatatcatt
gacttgcactcaatgcaccagttcagacaggacacaggtacattaaggccagtacgacgg
agtttctatgatcctacttcagcaccaggccaaggctggctgtgggagtgggagaatgat
gcgggttcttggacaccgtacgacatggaggtctgcatcgccctgcaagcggcgaaggac
cgccagcagccctggttggacctggcaccacttggcttctgctacctcgtggacttccag
agcatgactcaggtcaaccgacaaacacagagacgccgccgcattcagagacgctcagac
atagcttacccactggtctctgggccactgccgaaagcctcccaggcttggggagctggt
actggaggggcagctggtggaatgccgtcaggtggaggctcaactggaggacttctgggt
gtaggagtgtctggttctagctcaagtgataatgggagcgcgatttatcctagtggaact
ctttcaatgtcgtctcttgcccctcttggacagccatgtgcctgccagcagtgtatgctt
gtcttaagtgtgaaagcaaatgccttggcttcacacacactagggcgcagacctcctcaa
atgaagcccccaagtcctaagtccagcctagggacacttccctccttgtctaagacttca
tccatgtctaattcatattcacagacgctgcctcatgggctgtcctttaaccgctccctc
tcgcaagaacgcaagaacgctgctgcctttgctcattcgctgtccatgctcacctcgaac
actgccaccctttcgctgtcctctggtcgtccacctcctccacctttgccccctcctcca
cctccttcaggatccagccagcagcctttaactgtgccaaactgctcctcaacatctcct
ccgtcagtgccaactgcaacgctcatcactgtggcatcgagcaccacattgtgttcaccc
acaccttcgccttcagcaacagttccgcctcagcgttccacggcatgtgccgctcctctg
cctcctcgtgccagtcttgcagggctgagccggccagctctacaaagaatcgccatggca
cagtcacgtgcgctcattgcctctggagtaccgacagtacctgtaaagaacctcaatggc
tccagccctgttcatccagctttagcaggaatcaccggcattctaatgagcgctgcagcg
ctgcctgtgtgtttgactcgtcctcctaaactggtgctgcaccctcctcctgtcagtaag
agtgacatcaaacccatccctggccttggacactgctgccgcaaaaccaccaaaaaacag
gctcgcaagggcaagactcctgaagaagtagtgaagaggtacttgcagaaagtcagaaat
cctcctgaagaggactgcactatctgtatggaggctctgaccggtccctctgggtataaa
ggcccaggcgtgggtggtgtgtcgcgtgcagagtcagtgggtcgactggcacaatgtggc
catcagtaccatctgcagtgcttggttgctatgtacaacaatggcaacaaagacggcagc
ctacagtgccccacgtgcaagaccatctatggtgtgaagacgggcaaccagccacccggc
aagatggagtaccatgtcatcccccattcactgccaggacaccctgactgcaaaaccatc
cgcattatttataacataccacccggcatacagagccctgagcacccgaacccaggaaag
ccattcactgcaagaggatttccccgtcactgctatcttccagacagcgagaaaggacgc
aaggtgttgaggcttttgctggtagcttgggacaggcgactgattttctcagtgggcacc
tccagcaccactggcgagtcagacacggttatctggaacgaagttcaccacaagactgag
tttggctccaacctcacgggccatgggtaccctgaccctggctacttagataatgtgctg
gaagagctgaaagcccaaggcatcacagaggaggatggacagcagctgtga
DBGET
integrated database retrieval system
