Colossoma macropomum (tambaqui): 118810693
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Entry
118810693 CDS
T09004
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118810693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118810693
03021 Transcription machinery [BR:
cmao03021
]
118810693
Transcription factors [BR:
cmao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
118810693
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118810693
RNA polymerase III system
TFIIIB
118810693
RNA polymerase I system
SL1/TIF-1B
118810693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
TFIIA
Motif
Other DBs
NCBI-GeneID:
118810693
NCBI-ProteinID:
XP_036430552
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MEQNNSLPPFPQSLASPQGAMTPGLSMFSPMMPYGTGLTPQPVQNTNSLSILEEQQRQQQ
QQQQQQVSQQQGGIVGASGQTPQLYHSQAVSTTTALPGNTPLYTTPLTPMTPVTPATPAS
ESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSS
GKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLT
HQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFR
KTT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacaacagcttgcccccatttccacaaagtttagcatctcctcagggagct
atgacacctggtctctccatgtttagcccaatgatgccatatggtacagggcttacacca
caaccagtgcagaacacaaacagtttgtcaatcctagaggagcagcagaggcagcaacag
cagcaacagcagcagcaagtctctcagcagcagggtgggatagtgggagcatcaggccag
acgcctcagctgtaccactcacaggcagtttccaccaccacagcactgccaggcaacacc
ccgctctacaccacccctctgacccctatgacaccagtcacacctgccacacctgcctca
gagagttctggcattgtcccccagttacaaaatattgtgtcaacggtgaacttggggtgt
aagcttgacctgaagacaatagcactccgagccaggaacgctgagtataatcctaagcgt
tttgctgctgtcattatgagaatacgagaacccagaacaacagctttgattttcagttca
ggcaagatggtgtgtacaggagccaagagtgaggaacagtctcgcctggcagccaggaag
tatgccagagtagttcaaaaactgggtttccctgccaaatttttggacttcaaaattcaa
aacatggttggaagttgtgatgtaaagttcccaattcgactggagggcttggttcttacc
catcagcagttcagcagttatgaacctgaattattccctgggttaatttacagaatgatc
aaacccagaattgtccttttaatatttgtttctggcaaagttgttctcactggtgcaaaa
gtcagaggtgaaatctatgaagcatttgaaaatatttaccctatcttaaaaggattcagg
aagacaacatag
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