Colossoma macropomum (tambaqui): 118810868
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Entry
118810868 CDS
T09004
Symbol
pkd2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-2
KO
K04986
polycystin 2
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmao03037
]
118810868 (pkd2)
04040 Ion channels [BR:
cmao04040
]
118810868 (pkd2)
Cilium and associated proteins [BR:
cmao03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118810868 (pkd2)
Ion channels [BR:
cmao04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118810868 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
CNNM
Exo5
Motif
Other DBs
NCBI-GeneID:
118810868
NCBI-ProteinID:
XP_036430865
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MSSNRLRSQQQQQQPQPAPASLPPSEAIELGTVPHSAAEEESPCPPASSSRQAWSRDNPG
FEPEEGLMGASWAPESPGRRSLSTASSGSSGLGSFSGRIRGGLSPGRPAEGTQHGWSKRI
LSKIRVLWGTRLMEEHDSSREVYLKNVLREMVTYLFFLITLCIITYGMVSTNMYFYTKVM
SQLFLDTPVSNGDPTTFKTLSTMEDFWKYTEGPFLNGMYWDMWYNNKSLPENQSLIYYEN
LLLGVPRLRQVKVLNKSCPVHEDLKDEVYDCYSTYSPASEDKAAFGLKNGTAWVYSEESS
LGEGSYWGEVATYRGGGYYQDLSRTREESARQLRELKDNLWLDRGTRAVFLDFSVYNGNV
NLFCIVRMLVEFPATGGAVTSWQFQTVRLVRYISSWDYFVGACEVVFCLFVLYYMVEEVL
EIRLHRLHYFKSLWNCLDVAIVTLSVPAIIMNIYRTSAVSNRLRCLLENHSTYPNFERLA
QLQVQFNNLAAVIVFLAWVKLFKFINFNKTMSQLSTTMSRCAKDLLGFAIMFFIVFLAYA
QLAYLVFGSQHNDFSTFQACIFTQFRIILGDFDFSEIEETNRVLGPIYFTTFVFFMFMIL
LNMFLAIINDTYSEVKADMAQQRSEMEITDLIKKGYHKAMVKLKLRKTTVDDISDSLRQA
GGKLNFDELRQDLRGKGHSDAEIEAIFAKYDLDGDQELTEHEHQQMRDDLEKEREDLDLE
RSSLPRPLSGRSFSRSQDDSEEDDDEDSGHSSRRRGSSSGGVSYEEFQVLVRRVDRMEHS
IGSIVSKIDAVIVKLEAMERAKLKRREVLGRLLDGVMEDERMGRDTEVHREQMEKLVREE
LERWESDDAISQVSHQQATPVGPGAQARPRSARPSSSLSTEGQDAGANGSGHL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgaaccgactccgctcccagcagcagcagcagcagccccagccggctccagcc
tccttaccgccgagcgaggccattgagctgggcacagtgcctcactcagcggccgaggag
gagagcccgtgcccgcccgcctccagctccagacaggcgtggagccgggacaaccctggt
tttgagccagaggagggcctaatgggggccagctgggccccggagagtcccggacggagg
tctctgtccacggcttccagcggcagcagcggcctggggagcttcagcggcaggatccgc
ggagggctttcgcccgggcgaccagcagagggcacccagcacggctggagcaagaggata
ctgtcaaaaatcagagttttgtggggaacacgtctgatggaggagcatgacagcagcagg
gaggtgtatctgaagaatgttctgagggagatggtcacctacctcttcttcctcatcact
ctgtgcatcataacatatgggatggtgagcaccaacatgtacttttacaccaaagtcatg
tctcagctcttcctggacacaccagtgtcaaatggagatcctacaaccttcaagaccctc
tcaaccatggaggacttctggaaatacacagaggggccttttctaaatgggatgtactgg
gacatgtggtacaacaacaagagcctgccagagaaccagagtctcatctattatgagaat
ctcctcctgggagttcctcgcctccgccaggtcaaagtgctcaacaagtcctgtcctgtg
catgaggacctgaaggacgaggtctatgactgctacagcacctactcgcctgccagtgag
gacaaggcagccttcggcctcaaaaacggcacagcgtgggtgtattctgaggagagctct
cttggagagggcagctattggggtgaagtggccacgtacagaggagggggttactaccaa
gacctgtcccgcacccgagaggagtccgccaggcagctgcgagagctaaaggacaacctg
tggctggaccgtggcaccagagcggtgttccttgacttctctgtctataatggcaatgtc
aacctcttctgcatcgtcagaatgctagtggagtttcctgccaccggaggcgctgtgaca
tcttggcagttccagacagtgcgcctggtgcggtacatatccagctgggactactttgtt
ggtgcatgtgaggtggtcttctgcctctttgtgctctactacatggtggaggaggtgctc
gaaattcgtctgcaccgcctgcactactttaagagcctgtggaactgtctggacgtcgcc
atagtaacactgagcgtccccgccatcatcatgaacatctacaggacatcagcggtcagt
aacaggctgaggtgcctgctggagaaccacagcacatatccgaacttcgaacggctcgct
cagctgcaggttcagttcaacaacctggctgcagtcatcgtcttcctcgcctgggtcaag
ctctttaagttcatcaacttcaataagaccatgagtcagctgtccaccacgatgtccaga
tgtgcaaaggatctgctgggcttcgcaatcatgttcttcattgtgttcttggcatacgcg
cagttagcttacctggtgtttggcagccagcataatgacttcagtaccttccaggcctgc
attttcacacagttccggatcattctgggagactttgacttctctgagattgaggagaca
aacagagtcctggggccaatctacttcaccacctttgtcttcttcatgttcatgattctg
ttgaacatgttcttggctatcatcaatgatacatactcagaagtgaaggctgacatggca
cagcaaagatctgaaatggagattacagacctcattaaaaagggataccacaaggccatg
gtaaaactgaagctgaggaagactacggtggatgacatctccgacagtttacgccaggct
ggagggaagctcaactttgatgaactccgacaagacctgcgaggaaagggacactcagat
gctgagattgaagctatttttgccaagtacgatctggacggagaccaggagcttactgag
catgaacaccagcagatgagggacgacctggagaaagagagagaggacttggatctggag
cgcagttcgctgcccaggcccctgagcgggcggagcttctctcgtagccaggacgactcg
gaagaggatgacgacgaggacagtggacacagctcccgtcgccgtggcagcagttctggg
ggcgtgtcttatgaggagttccaagtattggtgcggagggtggatcgtatggagcactcg
attggtagtattgtgtctaagatcgacgcagtcattgtgaagcttgaggccatggagaga
gccaagctgaagaggagagaagtgctcggccgattgctggatggtgtgatggaggatgag
aggatggggagggatacggaggtgcacagggagcagatggagaagctggtacgagaggag
ctcgagcgctgggagtcagatgacgccatctctcaggtcagccatcagcaggccactcca
gttggccctggagctcaggcccgtcctcgcagcgcccgcccctcctcctcactgtccact
gagggccaagatgctggggccaatgggagtggacacttgtaa
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