Colossoma macropomum (tambaqui): 118810872
Help
Entry
118810872 CDS
T09004
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118810872 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118810872 (herc3)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118810872 (herc3)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
HECT type E3
118810872 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
118810872
NCBI-ProteinID:
XP_036430875
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MLCWGSSAWGQLGLGDSESAVFEPRSCRMLNGKGLKEVACGGQHSLFLLHDGSVYTCGSN
SRGQLGHEKPGAKPELVVALDAQKIASVACGEAHSLAVNEQGQVFAWGTGDGGQLGLGTV
EEAVRVPRLIKKLCEHRISQVMCGNQHCIALSKDGQLFTWGQNSSGQLGLGKGEPSSLSP
QPLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLNDEQDRAVPCHIKFLRS
QKVVYISCGEEHTAALTKDGGLFTFGNGSRGQLGHDSTNNEPLPRRVLELMGTEVSQIAC
GKHHTLAFVPSTGLVYAFGCNAHGQLGLGTRGHAKIPMPVRNIQPPYLSSTQTTDTERYS
INRIHCGGDHSFLLLSHDKRCPEDFRIISTSKSISLINYESLNSWRLKLLDNSDSSITND
IILLLSSTACWNASFLDQSDDGHFKTNPKVPGIDLNSVRLLFETLMKPAYSRLLEQTTKS
FESLLIPQLPCSPPDVEAMRIYLILSECPALHDSKNYISLTIPLAMAILRLDTNPSKVLD
NWWSLVDCEVFSRLVEMYKSIVVFLLTSGKALLIPVFLESYISATLRLLEKLHKVNQKAH
HVEYNRFYIPDVTSLVDIQEDYLKWFLSKAEIKMRSPPVQSSVTLCAYPFILNAQAKTTM
LQTDAELQMQMAVSGANLHNVFMLLTLEPLLAQNPFLVLHVRRDHLVSDALRELTIYSDV
DLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYPESNLLWFSDKCFVEH
NWFHLIGIVCGLAIYNSTVVDLHFPLVLYKKLLDVCPALDDLKELSPTEGRSLQQLLDYE
RDDIEEAFCLNFAITREHYGVTEVKELVPGGESITVDRSNREEFVQAYLRYVFIDSVREL
YSAFSGGFLKVCGGRILSLFQPSELMAMVVGNSSYNWEELEKNAVYKGEFSASHPTVRMF
WEVFHDFPLEKKKQFLLFLTGSDRIPIHGMASLRIVLQSTSAAEHYLPVAHTCYNLLDMP
CYKTKETLRTRLTRAIEQYEGFSLV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggcagttcggcctggggtcagctgggccttggtgactccgagagtgct
gtgtttgagccacggagctgccgtatgttgaacgggaaggggctgaaagaggtggcctgt
ggaggacagcactcactcttcctgctacatgatgggagcgtgtacacgtgcggctccaac
agccgtggtcagttaggccatgagaagccaggagcaaagccagaattggtggtggcgttg
gatgcgcagaagattgcaagcgtggcatgtggagaggcccactctctggcagtaaatgag
cagggccaggtgttcgcctggggtaccggagatgggggtcagcttggtctagggacagtg
gaggaggctgtccgagtgcccaggttaataaaaaaactgtgtgagcatcgaatctctcaa
gtcatgtgtggaaaccagcactgcatagcactttctaaagatggtcagttgttcacatgg
ggtcagaactccagtggtcagctgggtttggggaagggtgagcctagctctctgtctcct
cagcccctcaaatctctgtgtgggatcccgctggctcagatcagcgctgggggagaccac
agcttcgccctttctctctctggagccgtgttcggatggggcaggaacagcgctggacag
ctgggcctcaatgacgagcaagatcgggccgttccctgccatattaaattccttcggtcc
cagaaagtggtctacatcagctgcggagaggagcacacagccgctctgaccaaggatgga
ggcttattcacatttggaaatgggtcaagaggacagctaggccatgactccaccaataat
gagcctctgccacgcagagttctggagctcatgggcacggaagtgtctcagatcgcttgt
ggcaagcaccacaccttggcgttcgtgccctccactggcctggtttacgcctttggctgc
aatgctcacggccaacttggcttaggaaccagaggacatgccaagatccccatgcctgtc
cgaaatattcagcctccatatctcagcagcacacaaacaacagacacagagagatacagc
atcaacaggattcactgcggaggggatcacagcttcctcttgctgtcacatgacaagaga
tgcccagaggactttcgcattatcagcacgtctaaaagcatttctctgattaattatgag
agtctaaacagttggagattgaagctcctcgacaattcggattccagcatcacaaatgac
atcatccttctgttgtcctcgactgcatgttggaacgccagctttttggaccagagtgat
gatggccattttaaaaccaatcccaaagtccctggcatcgatctcaactcagtcaggctg
ctgtttgagacattgatgaagcctgcctactcaaggctactggagcagaccaccaagagc
tttgagagcttgctgattcctcagctcccctgctcccctcctgatgtggaggccatgcgc
atttacctgatcctttctgagtgtccagccctccacgactccaaaaactacatctccctc
accatccctctcgccatggccatcctcagactggacaccaaccccagtaaagttctagat
aactggtggtcactggtggactgtgaagttttctccaggctggtggagatgtataagagt
atcgtggtgtttctgcttaccagtggcaaggccctcctcatccctgtatttctggagagc
tatattagcgctacgctacgactgctggagaaactacacaaagtgaaccagaaagcccat
catgtggagtacaatcgcttctacatccccgatgtcactagtctggtggacatccaggaa
gactacctcaagtggtttctgagcaaagctgagattaaaatgcgatctcctccagtacag
agttctgtcacattatgtgcctatccgttcatattgaacgctcaagccaagacaaccatg
ttgcagacagatgctgagctgcagatgcagatggcagtgagtggagccaacctgcacaat
gttttcatgctgttaaccctggaacctttgctggcgcagaacccctttctagtgctccat
gtgcgaagggatcacttagtcagtgacgcacttcgggagcttacaatctacagcgatgtg
gatctgaagaaacccctaaaggtgatttttgatggcgaggaggcagtggatgccggagga
gtcaccaaagaattcttcctgctcttgctgaaggagctgatggatccagtgtatggcatg
ttcacccactacccagaatccaacctgctctggttctctgataaatgtttcgtggaacac
aactggttccacttaatcggcatcgtctgtggcctggccatctataactccacagtggta
gacctgcactttcctctcgtgctctacaagaaacttttggatgtttgtcctgctctggat
gacctgaaggagctgtcccctacggagggaaggagtctccagcagctgttggactatgaa
agagatgatattgaggaagccttctgtctcaactttgctattacccgagaacattatgga
gtgactgaggtgaaggagctggttcccggaggagagagcatcacagtggaccggtccaac
agagaagagtttgtgcaggcgtacctgcgctatgtgttcatcgacagcgtgcgggagctg
tactctgcattctcaggcggtttcctgaaggtgtgtggaggccggatcctctcactgttc
cagccctcagagctcatggcaatggtggtgggcaacagcagctacaactgggaggagctg
gagaagaatgcggtctataaaggggagttttcagcctctcatcctacagtgcggatgttt
tgggaggtgttccatgactttcccttggagaagaagaaacagttcttattgttcctgacg
ggcagtgatcgcatccccatccacggcatggccagcctgcgcatcgtcctccagtccaca
tcagcagctgagcactacctgcccgtggcccacacctgctacaacctcctggacatgccc
tgctacaagaccaaagagacgctgcgcacacggctgacgcgcgccatcgagcagtatgag
ggcttcagcctggtgtga
DBGET
integrated database retrieval system