Colossoma macropomum (tambaqui): 118810886
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Entry
118810886 CDS
T09004
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmao01002
]
118810886 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118810886 (usp38)
Enzymes [BR:
cmao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118810886 (usp38)
Peptidases and inhibitors [BR:
cmao01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118810886 (usp38)
Ubiquitin system [BR:
cmao04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118810886 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
HPF1
Motif
Other DBs
NCBI-GeneID:
118810886
NCBI-ProteinID:
XP_036430902
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MDKILEALVSSSHPLTIKRAIVKKVVEAAEKEVTEEQCQALYRLTARLILQGEDAFQQQV
GQQVQEAYARFHRDEFARFLSKEFVLGLLQQGYGSLDRRDPAILDFLHGCLRLLLSCPAV
LELAPLMQTEVLRMVCERPEAALCAKLAALLTDFPQCVPRDKAAVLFCQQLVRTFAHFQC
PVGQEAELRRYVTQVSRVATLLQGIWKVEPATLLPSLQEVFAIISSTDPSFEPSIALASL
VQHIPLQMITVLIKSLTTDQNVKDASMTQALSRMIDWLSWPLANHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWYPIVRQGALAVLSHMLLSFQHSPEAFHLVVPHVVPLVQ
SLQNDGLPTSKAFLLQFTELIHCMMYQYSGFPDLYDSILEAIKELPKPSEEKIKFVLNQS
AWTSQSNSFASGLLRLTGKSETGKTGLVNLGNTCYMNSIIQTLFMATDFRRNVLSLHLNG
SNTLMKKLQLLFAFLAHTQRAAYAPRSFLEVSRPPWFTVGSQQDCSEYLRFLLDRLHEEE
KTLQALQTAKPKVVSVNAEGIGDGVTHSVNDTLSHSHVEPVVAEGDGRTLVERMFGGRLS
TRICCLQCHSLSEKEEPFTDLSLAFCPSAPQSAVGPCQGAVNGGSENLEGPVKEAQSVER
PATEPALSLHDLLEYFLAPEILEEENCYFCERCGSLQRAERVMRVVAAPEYLILTLLRFS
YDATCHVRRKILDNVGMPLRMCLPVHQHHASASNTAAVSSSSSSSPAQIDSPESGENLAK
KLKPSRREEEEERLTDTGREGGTKGERSGVHLVPYVLSSVVMHSGMSSESGHYYSYGRNV
SGTDVCAAATTIANSCSKNSETEAGLNHSGQSESFTASQDVVECGGQSSSEWFLFNDSRV
TFTNFQSVQNVTSRFPKDTAYVLIYRKQDIGGQPGGARGIVNSSKFNGEPPLHKDLMDAI
TKDNKLFLQEQELNARTRALQAASASCSFRPNGSDDNEPPGSCGPSGGGGGGGFNTVSRL
VF
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcctggaagctttggtgagttcgtctcaccccttaaccattaaacgagcc
atagtgaagaaggtggtagaggctgcagagaaggaggtgacagaggagcagtgccaggcc
ctttaccgcctgactgcgcggctcatcctgcagggcgaggatgcctttcagcaacaggtg
ggccagcaggtgcaggaggcttatgcccgcttccaccgggatgagtttgcccgatttctc
agcaaggagttcgtcctggggctcttgcagcagggctacggatcgctagaccggagggac
ccagctatcctggacttcctgcatggctgcctgcggcttcttctcagctgcccagccgtg
ctggaactggcgccgctgatgcagacagaagtgctacgaatggtttgtgagcgccctgag
gccgcgctctgtgccaaactggctgctctactgaccgacttccctcagtgtgtgccgcgg
gacaaagcagccgtgctgttctgccagcagctggtgcgaaccttcgcccatttccagtgc
ccagtgggccaggaggcagagctgcggcgctacgtcacgcaggtgagtcgcgtcgccact
ctgctgcagggcatctggaaggtggagccggccacgctgctgccgtcacttcaggaggtg
ttcgctatcatctcctctacagacccttcctttgagccctccattgctctggccagcctg
gtgcagcacatccctctgcagatgatcacagtcctcatcaagagtcttaccactgaccaa
aacgtcaaagatgccagtatgacacaagcactcagcaggatgatcgactggctgtcttgg
ccccttgccaatcatgtagacacctgggttattgctctactaaagggactggctgctgtg
cagaaattcactatcctcatagacgtcacattgctcaaaattgaactggtctttaatcgt
ttgtggtaccccattgtaagacagggagcattagctgttctctctcacatgctgcttagc
ttccagcactctccagaggcattccacctggtggttccccatgtggtaccgctggtgcag
tctctgcagaacgatgggcttcccaccagcaaagccttcttgctgcagttcactgagctg
atccactgcatgatgtaccagtactcgggcttccctgacctctacgacagcatcctcgaa
gccattaaggaactacctaaacctagtgaagagaagatcaagtttgtgctgaaccaaagt
gcctggacctcgcagtcaaactcttttgcctcaggactgctgaggcttacgggcaaatca
gagacagggaagacgggtcttgtgaacttgggcaacacgtgttacatgaacagcatcatt
cagaccctcttcatggctacagatttcagacggaatgtcttatccctgcatctgaatggc
tctaataccctgatgaagaagcttcaactcctctttgctttcttagctcatacacagcga
gcagcatatgcaccaaggagttttctagaagtgtcacggccaccctggttcacagttggc
tcccaacaagactgttctgagtatctgcgcttccttttggacagattgcatgaggaagaa
aaaactctccaagcgcttcagacagcaaagcctaaggtggtctctgtcaatgccgagggt
attggtgacggtgtgactcacagcgtgaacgacacactgtcccattctcatgtggaacct
gtggtcgccgagggtgacgggcggactctggtcgagcgaatgtttggcggccgtctttcc
acgcgcatctgctgtctgcagtgccacagtctgtctgagaaagaggaaccttttacggac
ctttccctggccttctgcccctctgccccacagtccgctgtaggaccctgccaaggagct
gttaatggaggcagtgagaatttggaaggccctgttaaagaagcccagagtgtagagcga
cctgcgaccgagccagctctgtccctgcatgacctcctggagtattttctggccccagaa
atcctggaggaagagaactgctacttctgtgagcgctgtgggtcactgcagcgggccgag
cgcgtcatgagggtggtggctgcgcctgaatacctcattctcacactgctgcgcttctct
tatgacgccacatgccatgtccgccgcaaaatcctggacaatgtgggcatgccactgcgc
atgtgcctgcccgttcaccagcaccatgcatctgcctctaatactgctgctgtctcttcg
tcttcctcatcctcaccggcgcagattgactcccccgagagtggcgagaacttagccaag
aagctgaagccatctcggagagaggaagaagaggaaaggttaacggacactgggagagag
ggaggtacaaaaggggaaagatcaggggtgcatttagtcccatatgtccttagttctgtc
gtgatgcattccgggatgtcctcagagagcggtcactactactcatatggcaggaatgtg
agcgggacagatgtgtgtgccgctgctacgacaatagccaattcctgcagcaaaaattct
gaaacagaggcagggcttaaccacagtggccagtcagaaagcttcaccgcttcgcaggac
gtagtagagtgtggaggacaaagctccagcgaatggttcttgttcaatgacagtcgagtg
actttcaccaactttcagtctgtgcagaatgttacaagtcgtttccccaaggacacagcc
tatgtactgatatacagaaaacaggacattggcggtcagcctggtggcgcacgaggtatt
gttaacagctcaaagtttaacggggagccaccacttcataaagacctgatggatgccatc
accaaagacaataaactcttcttgcaggagcaggagctcaacgccagaacccgcgctctc
caggcagcctcggcctcctgctcgtttcggcccaacggctcagacgacaacgagcctccg
ggcagctgtggcccttcgggtgggggagggggcgggggcttcaacactgtcagcagactg
gtcttctga
DBGET
integrated database retrieval system
