Colossoma macropomum (tambaqui): 118810941
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Entry
118810941 CDS
T09004
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118810941 (syf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118810941 (syf2)
Spliceosome [BR:
cmao03041
]
Complex B
Other components
Prp19-related factors
118810941 (syf2)
Complex C
118810941 (syf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
118810941
NCBI-ProteinID:
XP_036430995
LinkDB
All DBs
Position
Unknown
AA seq
238 aa
AA seq
DB search
MASGSEVSAPVISDEPAETAASQKREERLRKFRELHFKRNEARKLNHQEVVEEDKRLKLP
SNWEAKKARLEYELMVDAKKKECAERGEDYERVKLLEISAEDADRWEKKKKKKNPDPGFS
GYAEAQLRQYQRLTKQIKPDMEGYERQREEYGEDFHPTSNSLIHGTHVPSKEAINRMQED
VEKQIEKRSKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggctcggaggtatctgcgccagtcatcagtgatgagcctgccgaaactgca
gcatcccagaagagagaggaaaggctgagaaaattcagagagcttcattttaaaaggaat
gaggctcgtaagctgaatcatcaggaagtggtagaggaagacaagaggctgaagcttccc
tcaaactgggaggctaagaaagcccgactcgagtatgagctcatggtggatgcaaagaaa
aaggaatgtgccgaacgtggggaggactacgagcgtgtgaaactgctcgagatcagcgcc
gaggatgctgaccgctgggagaagaagaagaaaaagaaaaaccctgaccccggcttctca
ggatacgcagaggcccagctgaggcagtaccagaggctcaccaagcagatcaagcctgat
atggagggctacgaaagacagagagaggaatatggtgaagatttccaccccacctccaac
agcctgattcacggaacccacgtaccttctaaagaggccatcaaccgcatgcaggaggac
gtggagaaacaaattgagaaacgttccaaatacagccgccgcagagcgtacaacgatgac
gctgacatcgactacatcaatgagaggaacgccaagttcaacaagaaggctgagcgcttc
tatggcaaatacaccgcggagatcaaacagaacctggagagagggacagcagtgtaa
DBGET
integrated database retrieval system