Colossoma macropomum (tambaqui): 118811026
Help
Entry
118811026 CDS
T09004
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04137
Mitophagy - animal
cmao04140
Autophagy - animal
cmao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118811026 (hif1aa)
04137 Mitophagy - animal
118811026 (hif1aa)
04148 Efferocytosis
118811026 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118811026 (hif1aa)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118811026 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
118811026
NCBI-ProteinID:
XP_036431113
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MTSGAAPEKKRVSSERRKERSRDAARCRRGKETEVFYQLARELPLPHSVTSNLDKASVIR
LTLSYLRLRSLLHTGALGEGCEVDSRWSVCCLKALDGILLVLSQDGDVVYVSENVSKCLG
LPQIDLLGQSVFDFTHPCDHEEIREMLVHRTGLSKKGKEEHQSERRILLRMKCTLTSRGR
TVNIKSATWKVLHCSGHIRAQAEVCGRADVQEGTGAHASYLVLNCEPIPHPASIESPLDS
RTFLSRHTLDMRFTYCDDRVTELLGYDPKDLLQRSVYEYYHALDSDSLTKTHHNLFVKGQ
ACTGQYRMLVKTGGFVWVETQATVIYNNKNSQPQCVVCVNYVLSGVEEPELVLSVHQSGS
AVVKQEREDEEEERESEGGKQECSQKMKSKEEASSKREEQTAVLFDDLKGEPEALTQLHF
SSTDTEVSVLKDVPLYSDVMLPSTSDLLSLSPLSPPTEAPCAILNHSDSTTAQLQLEDFT
FPSSNTPSTAGGATRSSTQPISSLTSDLSNQCKVDVVEEMFSMETEPKTLLATQAVEDLD
LEMLAPYISMDDDYQLHSHSPMQSGRVSPVPTSKSAQKDSPNQTQMLICSTGTNTKPSEQ
LTAAQPQQSFSRACQPDLHLSSATQPSQKPLKRKLETISLSQAIGLGSVLQVVSDLPGAG
KRVRKSEVAGLEAVSQSTVPESVTILLLPSDVLNQLLAGPSEGRTLPVPLPQLTRYDCEV
NAPVAGRQNLLQGEELLFALDQSI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaggagccgcacctgaaaagaaaagggtgagctccgagaggaggaaggagcgg
tctcgggacgcggcccgctgtcgacgggggaaggagacggaggtgttttaccagctggcc
cgagaactgccccttccacacagcgtcacatccaacctggacaaagcctcggtcatcaga
ctgaccctcagctacctgcggctgcgctctctgctgcacacaggagcgctgggtgagggc
tgtgaggtggactctcggtggagcgtgtgttgtctgaaggctctagacgggatccttttg
gttctctctcaggatggagacgtggtctatgtttcggagaatgtcagcaagtgccttgga
cttcctcagattgatctattgggacagagtgtgtttgatttcactcacccgtgtgaccat
gaggagatcagagagatgctggtgcacagaacaggtctgtctaagaaaggaaaggaggaa
catcaatcagagagacgtattctgttgcggatgaagtgcactctgaccagcagggggcgc
actgtcaacatcaagtctgccacatggaaggtgctgcactgttccggccacatccgagcg
caggccgaggtgtgcgggcgggcagatgtgcaggagggcacaggtgcacatgcgtcgtac
ctggtgttaaattgcgagcccatccctcacccggccagcatcgaatctcctctggactcc
agaactttcctcagcagacacacactcgacatgcgcttcacatactgtgatgacagggtc
acagagctgttgggatacgaccccaaggatcttctgcagcggtcagtgtatgagtattac
cacgctctggactcagacagtctgaccaaaacacaccacaacttgtttgtgaaaggtcag
gcgtgtaccgggcagtaccgaatgctggtgaagacgggcggcttcgtgtgggtggagact
caggccacggtgatttacaacaacaaaaactctcagccgcagtgcgtcgtctgtgtcaac
tacgtcctcagcggagttgaagagcctgaacttgtcctctctgtccaccagtccggctct
gcagtggtaaagcaggaaagggaggatgaggaagaagagagagagagtgagggaggaaag
caggagtgctcacagaaaatgaagagtaaagaggaggcgagcagtaagagagaggagcag
actgcagtgctctttgatgacctgaagggggagccagaggccctaactcagctgcacttc
agcagcacagatacagaggtcagtgtgttaaaagacgtccccctctacagtgacgtcatg
ttgccctccaccagtgatctgttgtccctttcacccctttcaccccccactgaagccccc
tgtgccatcctaaaccattccgactccaccactgcccagctccagttggaggacttcacc
ttcccgtcatcaaacacccccagcactgcagggggagccactcgcagctccactcagccc
attagctcattgacctctgatctcagcaaccagtgcaaagtggacgtagtggaggagatg
ttttccatggaaacggagccaaaaaccctcctggccacacaggcggtggaggacttggat
ctggagatgttggctccttacatctccatggatgatgattatcagctccacagtcactct
ccaatgcagtctggacgtgttagcccagttccaacatcaaaatcagctcagaaagattca
ccaaaccagacacagatgctgatctgcagcactggcaccaacactaaaccctcagagcag
ctcacagcagcacagccacagcagagcttcagcagggcgtgtcagccagacttacatctc
tcctccgcgactcagccgagccaaaagccactgaagaggaaattagaaacaatttctctg
tctcaggccatcgggctgggctctgtgctgcaggtggtcagcgacttacctggagcaggt
aaaagggtcaggaagtcggaggttgcaggattggaggctgtttcacagtccactgtgccg
gagtccgtcactatactgctgctgccctctgatgtgttaaaccagttgctggctggacct
tctgaaggcaggacactccctgtgcctctgccccagctgacccgctacgactgcgaggtc
aacgcacctgtagctggacgtcaaaatctgctgcagggggaggagctgctgtttgccctg
gaccaaagcatttaa
DBGET
integrated database retrieval system
