Colossoma macropomum (tambaqui): 118811051
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Entry
118811051 CDS
T09004
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118811051 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118811051 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118811051 (srsf5a)
Spliceosome [BR:
cmao03041
]
Common components
Common spliceosomal components
SR proteins
118811051 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
OB_RNB
DUF4090
Motif
Other DBs
NCBI-GeneID:
118811051
NCBI-ProteinID:
XP_036431149
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDYRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGRFSPRFRGYRQSRSGGSRYGPPVRTEHRIIVEN
LSSRISWQDLKDLMRKVGDVTFVDAHRTKKNEGVVEFASHSDMKNAIEKLDGTDLNGRKL
KLYEDRERNRSRSRSRSSSRSRSRSRSKSASRSRSRESKRESKRSRSRSRSASRTPEKKP
SPASRSRSASPSPSAQRKPSRSRSRSRSRSRSRSRSAESQH
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgccgtgtgttcattggccgcctgagcccacacgcccgggagagagacgtg
gagaagttcttcaagggctacggacgcatccgagagatcaacctgaaaaacggcttcggc
tttgtggagtttgacgactacagggatgcagatgatgccgtgtacgagctcaacggaaag
gagctctgcagcgagagggtgaccattgagcatgctcggtcccgacgtggcagaggtggt
ggacctggaatggggggaggacgcttctctccacgcttccgaggctaccgtcagtcccgc
agcggaggatccaggtatggtcctcctgtccgcacggagcacagaatcatcgtggagaac
ctgtcctcccgcatcagctggcaggacctgaaggacctgatgcggaaagttggagacgtg
acgtttgtggacgcccacagaaccaaaaagaacgaaggggttgtcgagtttgccagtcac
agcgatatgaagaacgccattgagaagctggatggcaccgacttgaacggccgcaagctg
aaactgtacgaggaccgcgagaggaaccgcagccgaagccgatcccgcagctcctctcga
tcccgatcccgctctcgctccaaatcagccagccggagccgcagccgcgagagcaagcga
gagagtaaacgctcccgcagccgctcgcgctccgccagcagaactccggagaagaaaccg
tcgccagcgtctcgctccagatcagcgtcgccatctccctccgctcagaggaaaccgtcc
cgctctcgatcccgatcccgatctcgatcccgctctcgctcccgatccgctgagagtcag
cactga
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integrated database retrieval system
