Colossoma macropomum (tambaqui): 118811086
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Entry
118811086 CDS
T09004
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118811086
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
118811086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
118811086
NCBI-ProteinID:
XP_036431188
LinkDB
All DBs
Position
Unknown
AA seq
2032 aa
AA seq
DB search
MFCWGDASRGQLLSPGAEGSFLTTPTLVNAFGEQIVSVSCGEQHTVFVSEGGRVFTCGRN
SKGQLGRAKSKETKVPVIEGLGGVASVACGQEHSLALCDSGQVFSWGGGGEGQLGVSSPV
AKSTKPGPVHVPSPLPIPVVQIACGNFHSLALTKGGEVYAWGQNSYGQLGLGKAVALQAI
PALVQALTGVPVIQISAGGAHTLALTSSAQVFCCGANSAGQLGLKRTDDKGRFTICAIPA
LRSLPIASISCGAAHTAVLTKGGEVYTFGDGTHGQLGHNSTSRELLPRKVEGIDGQAKQV
TCGSHHTLVLMPSGVLFAFGQGVNGQLGNGSTENSLRPVRLEGSWNSSGAERQREVRISS
GWNSNFLFFPPPKKSVLGEPIGKLDDARVQRWVSVLERDRYTEEAKREVGLTFSTSSSLV
ACFMKDNGAVRRNSPGTIAVDLDAASQTFDKILKIPWIKKAVEVNIHPLVHNLWLAAPVM
KCPEIFLLLPTCSILHEDRNVIELVLPLAVAITALNDSAMKTLKDYWSSMEAPMMSKHIC
MWKCALAFLLKANVWLSFIPGVKAVLEVLKYLYKSNKRVARSRKVPLNEFYIEEIGMSPL
LLQQDVTLWRQLKWGQVQEVDALPPVFCRYPFLLDLQSKINIFNYDAAITKMTHSFIHGQ
VSAGLLQDLYTQAPTPVILLRLRRTALLEDAFRQLSYADHDNFKKELLVEFVEDSKQTAV
NKRDFFLHAFNELLAPESEMFMYNDTQTMIWFPSQPKVESKQYFLLGILCGLALNNSNIV
HMPFPLAMFKKLVNVKPTLDDMIEFRPTVGKSLRCLLYDYTDDVIENMDTTFCVHWEGVN
VELDPQEKGKPVTSANKKEFVDAYVDYAMNKSVERVFEEFRRGFYKVCDRDVVEFFQPEE
LRGVMVGTEEYDWDVFRQNTVYDGQFHVRHPTIVTFWEVFEELTDEQKKAFLLFLTGCDR
VPILGMEQVKMVVSVLPNSTQDHLPESLTCHCILMIPQYNSKQRLQSKLIEALKHNRGFW
RDEPGARASERCRLDLQNFHAEMFCYWGDDVRAGFGLVKPDGVKKTTSGVFFCSPKSRIK
QLAPGKGLVGFVRGEGNVSVIRVPPAGGLQCGRLKNLELKDKIRLMSCGEAQAVLLTYAG
RTFWMDKYNHCRPVKELSSWNVIQVVCGDQHCMALTQDGQLFTWGQNSSGQLGLGKGEPS
FLSPQPLKSLCGIPLAQISAGGDHSFALSLSGSVFGWGRNSAGQLGLGDTEDRYIPACVN
NLSFKKTAFISCGEEHTATLSKGGTVFTFGLGRYGQLGHNSFRDEHRPRVVGALWGSEVS
QITCGRYHTLALVGSSKTIYLFGCGEQGQLGNGQRTNQCVPLPVHLPADANHDQSVEQIV
AGGNLSFVLCSRQEADNSSVHPESNRGRGILTLGDRMIDRWISECDSNQWRTIKKEIKRL
FSSAACLNASFIKKSCDGHYQTSTSFSGLDMESVRAAVERLAQKEKVLLEVGKTVEKDLL
PSVGSTAVGAEALRVYLILPEILRVLNKPLHETKLTAELASAILKLNPPMLQALVNYWSD
LSDDFLKPFVELFHKPSAHLISQRTFNRQAESSDKHLQNLVHILQMLYKASCSGKRKITS
GDFFIYEINFLFEILQTVNMELNWLPDPVALANKQYLECTLALLNSTPCIFNLEAKCNLL
KLRQVRTCFRLVLRRNELLEDCFAQLRTANEFALKGRLQVVYSEKFEQTDVNKRDFFLNA
FRTLLEPQSKMFMYNDTKTLIWFPAEPSLQEERYFLFGCLCGLAFYNNSVVNLPFPLALF
KKLADVQPSLEDLTELCPVLGRSLQYILDYRDEDVDCMDMSFTIIWDNKEVELDPNEPGK
VVTSSNKKEFVEAYVDYAMNKSVERVFEEFRRGFYKVCDRDVVEFFQPEELRGVMVGTEE
YDWSALKKNATYEELFHAKHPTIVSLWKVFDGLSEKDKKAFLLFLTGFDRVPILGMNQVK
MRVRPLLNSTEDHLPQALTCHSLLELPMYQTKQTLKAKLMEALHHKRGFWEE
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atgttctgctggggagacgcgtccagaggtcagctcctctcacccggagctgagggcagc
tttctcaccaccccgaccttggtgaatgcgtttggtgaacagatagtgagtgtgtcgtgt
ggagagcagcacactgtgtttgtgagtgaaggtggccgagttttcacctgtggacggaac
tctaaaggacagctgggcagagcgaagagcaaagagactaaagtaccagtgattgaaggt
ctggggggagtagcctctgtggcctgtggtcaggagcacagtttggccttgtgtgactcg
ggtcaggtgttctcctggggaggaggtggagaaggtcagctgggcgtcagcagtccggtg
gcaaaatctactaaaccaggacctgttcatgtaccatcgcctttaccaataccagtagta
cagattgcttgtggaaatttccattctctggccctaaccaaaggaggcgaggtgtatgct
tggggccagaatagctatggtcagctgggtctggggaaagctgtggccctgcaggccatc
cctgccctggtgcaagctctcactggagtgccagtcattcagatctctgcaggaggagcc
cacactcttgccctcaccagctcagcacaagtcttctgctgtggggcaaacagtgctgga
cagctgggcctcaaaaggactgatgataaaggccgctttacaatctgtgctattcctgct
ttgaggtccttgcccatcgcttccatcagctgtggagcagcacacactgctgtcctcact
aagggtggagaggtttatacctttggagatggaacacatggtcagcttggacacaactct
actagtagggagcttctgcctaggaaggtggaaggtattgatggacaagctaagcaagta
acctgtggaagccatcacactctggttctgatgccgtcgggtgtcctctttgcatttggg
caaggggtcaatggtcagctgggcaacggcagcacagagaacagcctgagacctgtaaga
ctggagggatcctggaacagttcaggggcggagagacagagagaagtgaggatctcctca
ggctggaattccaacttccttttctttccccctcccaagaaatctgttcttggtgagccg
attggaaaactagacgacgcccgagtgcagagatgggtttcggtgttagagagagacaga
tacactgaggaagctaaaagggaggtgggcttgactttttctacaagttcaagtcttgtc
gcttgtttcatgaaggacaatggagctgttcgaaggaattctccaggcactatagcggtt
gatttggatgctgccagtcagacctttgacaagatcctgaagattccttggatcaagaag
gcagttgaggttaacatccatccgcttgtgcacaacctttggcttgctgcaccggtgatg
aagtgcccagagatcttcctgcttctacccacctgctctattcttcacgaagaccggaat
gtcattgaactggtgctgccattagcagtagccataacagcgcttaatgattctgccatg
aaaaccttgaaggattactggtcctccatggaagcccctatgatgtccaagcatatttgc
atgtggaaatgtgcacttgccttcctcctgaaggccaatgtgtggttatcatttatccca
ggagtgaaagctgtgctggaagtcctcaagtatctatacaagagcaacaaaagggtggcg
agatccaggaaagttcccctcaatgagttctacatagaggagatcggcatgtcacctctg
ttactccaacaggatgttacgctgtggcggcagcttaaatgggggcaggttcaggaagtg
gatgctctgccacctgttttctgccgttacccgtttcttctggatctgcagagcaagata
aacatttttaactacgatgctgccataacaaagatgacccactccttcattcatggccaa
gtgtcggctgggctgcttcaggatttgtacacacaggccccgacgcctgtcatcctgctt
agactgagacgcactgctctgctggaggacgcgttccgacagctctcctatgctgaccat
gacaacttcaaaaaggagctattggtggaatttgttgaagattccaaacagacagctgtc
aacaaaagagatttcttcctccacgccttcaatgagcttttagctccggagtcagagatg
ttcatgtacaacgacacccaaacaatgatttggttcccatcccagcccaaggtggaatca
aagcagtactttctgttagggatcctctgtggcctagcactgaataacagcaacatagtg
cacatgcccttccctctggccatgtttaagaagctggttaacgtgaagcccaccctggat
gacatgattgagttcaggcctacagttggaaagagtttgagatgtcttctgtacgactac
actgatgatgtcattgagaatatggacaccaccttctgtgtgcactgggagggagtcaat
gtagagctggatcctcaggaaaaaggaaaacctgtgacaagtgctaataaaaaggagttt
gtggatgcctatgtggattacgccatgaacaagtcagtggagcgagtatttgaggagttc
aggaggggtttctacaaagtgtgtgaccgagacgtggtggagttcttccaaccagaggag
ctgagaggagtgatggtgggcacagaagagtatgactgggatgttttccgacagaacacg
gtttatgacggacagttccacgtgagacaccccactattgtcaccttttgggaggtgttt
gaggagctgacagatgaacagaagaaagcctttctcttgtttttgacgggctgtgatcgt
gtacccatccttggaatggagcaggttaaaatggttgtgtctgtcctgcccaactccacc
caggaccacctgccagagtcactcacctgtcactgcatcctcatgatcccacagtataac
agcaagcagcggctgcagtccaagcttattgaagccttaaagcacaacagaggcttttgg
agagacgagcccggcgcgcgagcctcagagcgctgcagactcgatctacagaactttcac
gcggagatgttctgctactggggagatgatgtcagagcgggctttgggctggtcaagcct
gacggagtgaagaagaccacttcgggtgttttcttctgttctccaaaatccagaatcaag
cagctcgcgcccgggaaagggctggtgggcttcgtgcgcggagaggggaatgtgtccgtc
atcagagtgccccctgcgggcggactgcagtgcggcaggctgaagaatctggagctgaaa
gacaagatcagactgatgagctgcggagaagctcaagcagttcttctcacatatgcaggc
agaacgttttggatggacaagtataaccactgcagacccgtcaaggagctctccagttgg
aatgtaattcaggttgtttgtggcgaccagcactgcatggcactaacccaggatggtcag
ctgttcacgtggggtcagaactccagtggtcagctgggtttggggaaaggtgagcccagc
tttctgtctcctcagcccctcaagtctctgtgtgggatcccgctggcccagatcagtgcc
gggggagaccacagcttcgccctttctctctctggatctgtgttcggatggggcaggaac
agcgctggacagctgggcctgggggacactgaggacagatacattccagcctgtgtgaat
aacctgagcttcaagaaaacagccttcatctcatgtggagaggagcacactgccactttg
tcaaagggaggaactgttttcacatttggattgggtcgttatggccagctcggacataac
tcgttcagagatgaacaccgacctagagtggtgggtgcactctgggggtcagaggtgtcc
cagatcacctgtggaaggtatcacactttggcactggttggatcatcaaaaacgatctac
ttgtttggatgtggagagcagggacagctgggaaatggacagagaaccaatcagtgtgtg
ccacttcctgtacacctgccagcagatgcaaatcacgaccaatcagttgagcagatcgtt
gctggtgggaacctttccttcgtcttgtgctctcggcaggaagctgataatagctcagtg
cacccggaatcgaaccgagggagagggattttaacgttgggggaccgaatgattgacaga
tggatatctgagtgtgactcaaatcagtggaggacgatcaagaaagaaattaaaagactg
ttctcatctgctgcatgtttgaatgcgagcttcattaagaaaagttgtgatggacattat
caaacttctacaagcttctctggtttggatatggaatcagtgagagctgctgttgagcgg
ttagctcagaaagagaaggtgctgttggaggtagggaagactgtggaaaaggatctgctc
ccctctgtgggctccactgctgttggtgctgaagctctgagagtttacctcatcctgcct
gaaatcctcagagtgctgaacaaacctctgcatgagacaaaactcactgctgaattggct
tctgccatcttaaagctgaaccctcctatgctccaggctttggtgaactactggtctgat
ctctctgacgacttccttaaacccttcgtggagctctttcacaaaccatctgcacacttg
atatctcagaggacatttaacagacaagcagaatcctcggacaaacatctacagaacctt
gtgcacatcttacagatgctctacaaggcgtcctgcagcggcaaaagaaaaatcacatct
ggagattttttcatctatgagatcaactttctgtttgaaatattgcaaactgttaatatg
gagctgaattggttgcctgaccctgtagcgctcgcaaataaacagtatctagagtgtacc
ctggcccttctgaactccactccttgcatctttaacctggaagctaaatgcaaccttcta
aaattgagacaagtgaggacttgcttcaggctggtgttgagacgcaatgagctcctggag
gactgtttcgctcagctgagaactgctaatgagttcgctctgaaaggtcggctgcaggtg
gtgtactctgagaagtttgaacaaacagacgttaataaaagagacttctttctcaatgca
tttcgcactttgttggaaccacaatccaaaatgttcatgtacaacgacacaaaaacactg
atctggtttcctgctgagcccagtttacaggaggagcgctactttctgtttggatgcctg
tgtggtctggccttttacaacaacagtgtagtgaacctgccctttccgttagccctgttc
aagaagcttgctgatgtccagccttccctggaggatctgactgagctttgtcctgttctt
ggaaggagcttgcagtacatactggactacagggatgaagatgttgattgcatggacatg
agtttcacaatcatatgggacaacaaggaggtcgaactggatccaaatgagcctgggaaa
gtcgtcacaagctcaaacaaaaaggagtttgtagaggcctatgtggattacgccatgaac
aagtcagtggagcgagtgtttgaggagttcaggaggggcttctacaaagtgtgtgaccgt
gacgtggtggagttcttccagcccgaggagcttagaggagtgatggtgggcacagaggaa
tacgattggagtgcactcaaaaagaatgcaacttatgaagaattgttccatgcaaaacac
ccaactattgtctcactctggaaagtgtttgatggactgtcagaaaaggacaagaaagcc
ttcctcttgtttttgacggggttcgaccgagtgccgattctgggtatgaatcaagtgaag
atgagggtgcgccccctattaaactctactgaagaccacctgcctcaagcccttacctgt
cattccctgctggagctccccatgtaccaaaccaagcaaactctcaaagctaaactcatg
gaggccctacaccacaagaggggcttctgggaggaataa
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