Colossoma macropomum (tambaqui): 118811305
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Entry
118811305 CDS
T09004
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118811305 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118811305 (mid1)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118811305 (mid1)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118811305 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
PRY
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
zf-C3HC4_2
Ig_ILCR1
U-box
Motif
Other DBs
NCBI-GeneID:
118811305
NCBI-ProteinID:
XP_036431359
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MHDKHTLFVPAEDFHLHPDAAAAPRDAFTSQNHGDAEPSLGFADVTVACPCLKMDTLESE
LTCPICLELFEDPLLLPCAHSLCFNCAQRILITHCASSPEPSHPASAFQCPTCRYVITLS
QRGLEGLKRNVTLQNIIDRFQKASLSGPNSPSETRRCNRDRERESLPFGISDAPTMSASE
AVQCQFCDQDPPQDAVKTCITCEVSYCEECLRATHPNKKPFTGHRLTEPLPDSRLRGLAC
PEHAEEKVNMYCMTDELLICSLCKLVGRHRDHQVAALGERYEKLKHGLESNLSSLIKRNN
ELEGLMGKLIQTCQHVEMNASRQENKLLEECDTLIDIIQQRRQIIGTKIKEGKVVRLRKL
AQQISSCKQCIERSSSLITQADQALKETDHARFLQTARSISERVSMATASSQILIPEINV
NDTFDTFALDFSREKKMLEGLDYLTAPNPPAIREELCTASHDTISVHWTAEDEFSVVSYE
LQYTIFTGQTNVVSLCNSADSWMLVPNIKQNHYTVHGLQSGTKYIFVVKAMNHAGSRSSE
PAKLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETSSKKSHSQDRFGSTGSYGVTGNVY
IDSGRHYWETLIGGSSWFAIGIAYKSAPKHEWIGKNSSSWVLCRCNNSWAVRHGGKELPV
DPSPHMRRIGVLLDYDLGSLAFYDAAGTQHLHTFDIAFSQPVCPVFNVWNKCLTVLTGLP
IPDHLETNDPRA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcatgataaacacaccctgtttgtcccggctgaagactttcacctccatccagacgcc
gccgctgctccacgagacgccttcacatcacagaaccatggagacgcagaaccatccctg
ggtttcgctgacgtcaccgtcgcttgcccatgtctgaagatggacacactggagtcggag
ctgacctgcccaatttgtctggagctgtttgaagaccctctgctgctgccctgcgcccac
agcctgtgctttaactgcgcccagcgcatcctgatcactcactgcgcctcatcgccagag
ccctcgcatcctgcctccgccttccagtgcccgacctgccgctatgtcatcaccctcagc
cagcgcggcctagaggggctcaaacgtaacgtgaccctgcagaacatcatcgaccgcttc
cagaaggcctccctgagtgggccaaactccccgagcgaaacccgccgctgcaaccgggac
cgagagcgtgaaagtttgccgtttggtataagcgacgctccgaccatgagcgcgagcgag
gctgtccagtgccagttctgcgatcaggatcctcctcaggatgctgtcaaaacctgcatc
acctgcgaggtgtcctactgcgaggaatgcctgcgggccacgcaccccaataagaaaccc
ttcacgggtcaccggctgaccgagccgctgccggactcgcggctgcggggcctggcctgc
cctgagcacgccgaagagaaggtcaacatgtactgcatgacagacgaactgctgatctgc
tctctgtgcaagctggtgggacgacaccgtgaccaccaggtggctgcccttggagagaga
tacgagaaacttaagcatggactggaatcgaacctcagcagcctgatcaagcggaacaac
gagctggagggtctgatggggaagctgatccaaacctgccagcatgtagagatgaacgcg
tctcgacaggagaacaagctgttagaagagtgtgacacactgatcgacatcattcagcaa
cggaggcaaatcatcgggaccaaaataaaagagggcaaggtggtgcggctccgtaagctg
gcgcagcagatatccagctgtaagcagtgtatcgagagatcgtcctccctcatcacccag
gccgaccaggctcttaaagaaacggaccacgcccgcttcctccagaccgcccgcagcatc
tcagagagagtttcaatggcaacggcatcctcacagatcctgatccccgagatcaacgtg
aacgacacgttcgacacgttcgcgctggacttcagccgagagaagaagatgctggagggc
ctggattacctgaccgctccaaacccaccggcgatccgtgaggagctctgcacggcgtcc
cacgacaccatctcggtccactggacggcggaggacgagttcagcgtcgtctcctacgaa
ctccagtacaccatcttcactgggcagaccaacgtcgtcagtttgtgtaactcggccgac
agctggatgctggtgcccaacatcaagcagaaccactacacggtgcacggcctgcagagc
ggaaccaaatacatcttcgtggtgaaggccatgaaccacgctggcagccgcagcagcgag
ccggccaagctgaagaccaacagtcagccgtttaagctggacccaaagtcggctcacaag
aagctgaaggtctcccacgacaacctgaccgtggagagggacgagacgtcctcgaagaag
agccactctcaggaccgcttcggcagcacgggaagctacggcgtcaccgggaacgtctac
atcgacagcggacgccactactgggagactctgatcggcggcagctcgtggttcgccatc
ggcatcgcctacaagtcggcgcccaagcacgagtggattgggaagaactcgtcctcgtgg
gtgctgtgccgctgcaacaactcgtgggcggtgcggcacggcgggaaggagctgcccgtg
gatccttcgccccacatgcggcgcatcggcgtcctgctggactacgacctgggctcactg
gcgttttacgacgcggcgggaacgcagcacctccacaccttcgacatcgccttctcccag
cccgtctgccccgtgttcaacgtctggaacaagtgtttgaccgtcctcacgggtctgccc
ataccggaccacttggagacgaacgatccgcgggcctag
DBGET
integrated database retrieval system
