Colossoma macropomum (tambaqui): 118811420
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Entry
118811420 CDS
T09004
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118811420 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118811420 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cmao03310
]
118811420 (nr3c1)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
118811420 (nr3c1)
Nuclear receptors [BR:
cmao03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
118811420 (nr3c1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
118811420
NCBI-ProteinID:
XP_036431507
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All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MQKEMDQGGLKNGVKRDEHLITLNYSDSPAEGVLHNGARSAMSIAPTSLVPPPSPLMQPV
SGDLPNGLSSSPTSQELTTLPSTLDLYLEDPDMKAVGKDLRAQQSFQQQSSLGLYSLADN
FSRLEASIADLNSSSPSVDSLIGGVDPSLFPLKNEDFSPIGKGDIELEPDPFGSIGKDMD
SGNPKLFSENTLDLLQDFELAGSPSDFYVGDDEFPPLGEDSLLGVIGPERDSKSTVSVST
TNSTSNNINISSNTSVNSATSCTSSGVTTTSSAPVVKVEKESLIQLCTPGVIKQENVGGQ
SFCHLAGSDLSSPLATTPISVCGVSTSSGQSYHFGGPPSAPTISIQQKDQKPIFNVFAQQ
TTAGDGWGRSLGLQQRASDSFTNTQNFTASYASSASRPELSVAASSGAGKSGGATHKICL
VCSDEASGCHYGVLTCGSCKVFFKRAVEGWRSRQNTDGQHNYLCAGRNDCIIDKIRRKNC
PACRFRKCLMAGMNLEARKVKKMKGLKGVQQVNTVEMSPAPVQEVRALVPKAMPQLVPTM
LSLLKAIEPETIYAGYDSTLTDTSTRLMTTLNRLGGRQFISAVKWAKALPGFRNLHLDDQ
MTLLQSSWLFLMSFSLGWRSYQQCNGNMLCFAPDLVINEERMKLPYMGDQCAQMLKISNE
FVRLQVSNEEYLCMKVLLLLSTVPKDGLKSQAVFDEIRMSYIKELGKAIVRREGNSSQNW
QRFYQLTKLLDSMHDMVGGLMNFCFYTFVNKSLSVEFPEMLAEIISNQLPKIKAGSVKPL
LFHQK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagagatggatcaaggaggtctgaagaacggcgtgaagagagatgagcacttg
attaccctgaattacagcgacagcccagccgagggagttttgcataacggagcacgcagc
gccatgtccatcgcccccacttctctagtccctccacccagccccttgatgcagcccgtg
tctggggaccttcccaacggactcagcagctcccctacttcacaggagctcacaacatta
ccatccacactggacctctatttggaggatccagacatgaaagcagttgggaaggacctg
agggctcagcagtccttccagcaacagtcttctctgggcctctacagtttggcggacaat
ttctcacggctggaggccagcattgctgatctcaacagctcctctccatctgtggactcc
ttaattggaggagtggatcccagcctctttccactgaaaaatgaggacttctcacccata
ggtaaaggggacatagaactggagccagaccccttcgggtctatcgggaaagacatggat
tcaggtaacccgaaattgttcagcgagaacaccctggacctcctgcaggatttcgagtta
gcagggtcaccctcagatttctatgtgggagatgacgagtttccgccgttgggtgaggac
tctctgctgggagtgatcggcccggagagggactcgaagtccaccgtttcagtgagcacc
accaacagcactagcaacaacatcaacatcagcagcaacaccagtgtcaacagtgcgacc
agctgcacttcctctggtgtgaccaccactagctccgcccctgtggtgaaagtggagaag
gagtctctgattcagctgtgcaccccaggggtgatcaagcaggagaatgttggtgggcag
agcttctgtcacttggccggttctgacctgtcaagccccctggctaccacacccatctcc
gtctgtggcgtcagcacctccagtgggcagagctaccacttcggaggccccccttctgct
cccaccatcagcatccagcagaaagatcagaaacccatttttaacgtgtttgcccaacag
accacggctggggacggctgggggaggagtcttgggctacagcagagggccagtgacagt
ttcaccaacacccagaactttactgccagctatgccagttccgcaagcaggcctgagctc
agcgttgctgcatcttcgggtgcggggaaatccggcggcgccacacataaaatctgcctg
gtgtgttcagacgaggcgtcaggctgccactacggcgtgctcacctgcggcagctgcaag
gtcttcttcaaaagagctgtggaaggatggcgatcgagacaaaacacagatgggcaacac
aattacctgtgcgctgggcggaacgattgtatcatcgataaaatccgcaggaagaactgt
cctgcctgccgcttccgcaagtgcctaatggccgggatgaacctagaagcacgtaaagtc
aagaagatgaagggcttaaagggtgtccagcaggtgaacacggtcgagatgagcccagct
ccagtgcaggaggtgcgggcgctggtgcccaaggccatgccccagctcgtgcccaccatg
ctgtccctgctcaaagccatcgagccagagaccatttatgctggctatgacagcacactg
actgacacctctactcggctcatgaccaccctcaacaggttgggtggccgccagttcatc
tctgctgtcaagtgggccaaagctctgccaggtttccgtaatcttcacctggatgatcag
atgaccttgctgcagtcatcctggctcttcctcatgtctttcagtctgggctggaggtcc
taccagcagtgcaacggcaacatgctttgttttgccccagacctggtgatcaatgaggag
aggatgaaactgccctacatgggtgatcagtgtgcacagatgttgaagatatccaatgag
tttgtcaggctgcaggtgtcgaacgaggagtacctgtgcatgaaggtcctgttgctgctc
agcacagtgccaaaggacggtctgaagagtcaggctgtgttcgatgagatcaggatgtcc
tacattaaagaactaggaaaagccatcgtcaggagagaggggaactccagccagaactgg
caacgattctaccagctcactaagctactggactccatgcacgacatggtgggtggactg
atgaacttctgcttctacacatttgtgaacaagtcgctgagcgtggagttccccgagatg
cttgcagaaatcatcagcaaccagttaccaaaaatcaaagctgggagtgtgaaaccgctg
ctctttcatcagaaatga
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