Colossoma macropomum (tambaqui): 118811509
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Entry
118811509 CDS
T09004
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03013
Nucleocytoplasmic transport
cmao03015
mRNA surveillance pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118811509
09122 Translation
03013 Nucleocytoplasmic transport
118811509
03015 mRNA surveillance pathway
118811509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118811509
03041 Spliceosome [BR:
cmao03041
]
118811509
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
118811509
Spliceosome [BR:
cmao03041
]
Common components
Common spliceosomal components
Cap binding complex
118811509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
FapA
AAA_13
Vfa1
AAA_11
DUF1690
Barstar
EMC3_TMCO1
GBP_C
FAM60A
Motif
Other DBs
NCBI-GeneID:
118811509
NCBI-ProteinID:
XP_036431632
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MSRRRHSDENDGAQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKSNL
YSEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDIPQVRSDWYVYAVLSCLPWV
GKELYEKKDVEMDRLLNQIDGYLKRRQKIHVPMLQVWSAEKPHPQEEYLDCLWAQVQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPAHSDDAVYPMPHVVFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHCIIKSHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPSPPHIEVMYTALLIELCKLQPGSLPQVLAQATEMMYMRLDTMNTTCVDRFVSWFAHH
LSNFQFRWSWDDWADCLTVDIEKPKPKFVKEVLEKCMRLSYHQRIVDIVPASFSALIPAE
PVFQYKYEDESNTSLPGLAMATTVSNAIKNRASNEEILAVLKEVPNPNQDDDDDEGDGFN
PLKIDVFLQTLLHLAAKSFSHSFSALAKFHEVLKTLTESDEGKLHILKVVYEAWRKHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSDMAHDFTRLYMWEILHSTIRKMNKHVQKIQKELE
EAKDKLEKQQHKKQKDSGDEEDMEKNSDDEDGQLEEQIERLQEKVESAQSEQKNLFLVIF
QRFIMMLTEHLVRCETGSVDINTSWYKNCIERLQQIFLMHHVTIQQYMGTLENLLFTAEL
DHHILAVYQQFCALQL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaagaaggcacagcgacgagaatgacggagcgcagcctcacaaaaggaggagg
acgtctgagccaattgaaatcgaggaccgtctcgaatcgctgatatgcagagttggagaa
aaaagcacatcctccttggagagtaatttggaaggccttgcaggcgtcctggaagcagat
ctgcctaattacaaaaacaaaatcctgcgcatcttgtgtgctgtggcgcggctcttacca
gagaagctaacggtgtatacgacactggtgggcctcttaaatgcacggaactataacttt
ggaggggagtttgtggaggccatgatcagacagctcaaagagacactgaagtcaaacctc
tactctgaagccgtttacttggtgcgtttccttagcgacttggtgaactgccatgtcatt
gcagctccctccatggtcgccatgtttgaaaactttgttagtgtcacgcaggaggaggac
ataccacaggtgcgctctgactggtatgtgtatgctgtgctgtcctgtttgccctgggtt
ggcaaagagctttatgagaagaaagatgtggagatggatcgccttcttaaccagattgat
ggctatttgaagagacgacagaaaatccatgtgccgatgctgcaggtttggtcagcagag
aaaccccaccctcaggaagagtatctggactgtctgtgggctcaagtgcagaaactgaag
aaagatcgctggcaagaacgtcatatcctgaggccatacattgcctttgacagtgtgctg
tgtgaggctctgcagcacaatctgccccccttcaccccaccagcccactctgatgatgcc
gtctaccccatgccgcacgtcgtctttcgcatgtttgactacactgatgctcctgaggga
ccggtcatgcctggcagtcactctgtggagaggtttgtgattgaagagaacctgcactgc
atcatcaaatctcactggagagagagaaagacttgtgctgcccagttgctgagctatcct
ggcaaaaataagattcctctaaactaccatatcgttgaggtgatctttggggaattattc
cagctgccttctcctcctcatattgaagtcatgtacacagcattactgattgagctctgc
aagctgcagcctggatcgttacctcaagttcttgcgcaagccacagagatgatgtacatg
agactggacacgatgaacacaacgtgcgtagaccgattcgtcagctggttcgctcatcat
ctgagcaactttcagttcagatggagctgggatgactgggctgattgtttaacagtggac
attgaaaaacccaaacccaaatttgtcaaagaggtgttggaaaaatgcatgaggctgtct
tatcaccagcggatagtagatattgtgcctgctagtttctctgctttaatcccagctgaa
ccagtgttccagtataaatatgaggatgagagcaacacttccttacctggcttagctatg
gcaacaacagtatcaaatgcaatcaaaaaccgtgcctcaaatgaagagattctggctgtg
ctgaaagaggttcccaatcctaaccaggacgatgatgatgacgagggagatggcttcaac
ccactgaaaatagacgtgttcctgcagacgctgctccacttggctgccaagtccttcagt
cactccttcagtgcccttgccaagttccatgaggtgttgaagactctgacagaaagtgat
gaggggaaactgcacattctcaaggtggtttatgaggcctggaggaagcacccacagatg
atcgcagtgctggtggataagatgattcgcactcagatagtcgactgtgctgctgtggcc
aactggatcttttcttctgacatggctcatgatttcaccaggctttacatgtgggagatt
cttcactcaaccattcggaagatgaacaaacatgttcaaaagatccagaaggagctggag
gaggccaaggacaagctagagaaacagcagcacaagaagcaaaaggacagtggtgatgaa
gaggacatggagaagaacagtgatgatgaggatggtcagctggaggagcagattgagagg
ctgcaggagaaagtggagtcagcgcagagtgagcagaagaacctatttcttgtcattttt
cagcgtttcatcatgatgttgacggagcacttggttcgctgtgagacaggaagcgtggac
atcaacacctcctggtataagaactgcattgagcgactacagcagattttccttatgcat
catgtgaccatccagcagtacatgggcactctggagaacctgctgttcacggctgaattg
gaccatcacatcctggctgtgtaccagcagttctgcgccctgcagctttga
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integrated database retrieval system
