Colossoma macropomum (tambaqui): 118811517
Help
Entry
118811517 CDS
T09004
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao02010
ABC transporters
cmao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118811517 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118811517 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmao02000
]
118811517 (abca1b)
Transporters [BR:
cmao02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118811517 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
AAA_23
SRP54
Motif
Other DBs
NCBI-GeneID:
118811517
NCBI-ProteinID:
XP_036431645
LinkDB
All DBs
Position
Unknown
AA seq
1913 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTFQLLIEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELIHAVKALQNNTSGFRLKDFLNDNETLSTFLIQNASFSENTVQDILKANVNLE
KVLMKGFGVHLKDMCNTSSLEDFVNITDRKVAKLTQDIICSSSQNWLNQAEKLFMTNLDF
FKPIRSDVSSGTSDARQVAKATENLLESLGSLAVELASMRSWSDLRNEILFLTQNATGSP
SQMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNYKALFGNYNSSDEEPVSVYDNTTTPYCN
NLMKHMETSPISRMIWRALKPLLMGKILYTPHTPATQKIIHEVNMTFQELGVLRDLGGMW
EETRPKVWNFMENSKEMNLVRTLLQNNATATFFSTQLTGTQWSVQDVISFLSKQSEDTRS
HGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKLVNESLGLLDNRKFWAGIV
FPDIDSNSSELPPHVNYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDLRYVWGGFSYLQ
DVIEQSIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIK
SVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLMSAGLLVLLLKMGNLLPYSDPGV
VFLFLGSFAVVTIMQCFLISTVFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGLPAKV
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLISSPMEEDDYSLTTSIILMYFDSFLYGV
MTWYIEAVFPGQYGIPRPWYFPFTKSYWFGEGDQKLTPTIQGKKANAGAVCTEEEPTHLD
MGVYIENLVKVYHHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRSELSAIRQSLGVCPQHNVLFSMLTVEEHVWFYARLKGLPEDAVRAEIDQIL
YDTGLPHKRKSRTSELSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRAGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKKEPEA
SLSSCRNSSSTVSYVKKDDEASESSSDAGLGSDHESDAVTAIGSSWTDSPIVPADISLIS
GLIIKHVPNARMVEDLGHEITYIMPYESAKDGAFVELFHDLDDHLADLGISSYGVSDTTL
EEIFLKVAEDSGVDTEMLSDGTLPVRRRRRHAFGADHQSCLKPLTEDDRFDGNESEADPD
SRETDYLSGSDGKGSYQIQGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIA
LVFSLIVPPFGKYPSLALHPWMYEDQVIFISDDAPEDASTQKLLGALMEGPGFGTRCMEG
EPVPDATCTMGDEDWSVPEVPESVLEVFRMQNWTMENPSPACECSCDGKKKMLPECPVSA
GGLPPPQMKISERDTLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYGGFSLGARS
TQLLPPAEEIDDAISRVREIFNLEKNSGTAADRFLKSLSAFINGLDTKNNVKIWFNNKGW
HSIGAFLNVMNNGILRANLPPEKDPSKYGITAFNHPLNLTKEQLSQVALVTTSVDVLVSI
CVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWLANFIWDMCNYVVPATLVII
IFVCFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGI
NGSVSTFVLELFGNNEVGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGENR
FRSPLAWDMVGKNLFAMAVEGVIFFIITVLIQYRFFFKPTSLSAKAESNWRGG
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctccactcagctgggcctgctgctgtggaagaatttcacctacagaagacga
caaacgttccagctgctgattgagatagtctggcctcttttcatcttcttcatcctgatt
gctgtgagattgaactaccccccatatgaacagcatgaatgtcactttcccaacaaagcc
atgccctcagcgggcactctgccatggatccagggcattgtctgcaacgccaacaacccc
tgcttccgccaccccacccctggagaatcccccggagtcgtcggcaacttcaatgattct
ataatctcacgacttttttctgatgccaagaaaatcttactgtacagtcagaatgataaa
agtctggatgggtttaaagagctaatccatgcagtgaaagctctgcagaacaacacttca
ggtttcaggcttaaagatttcctgaatgacaacgagaccctgtccacattcctcatacaa
aatgcttccttctctgagaatactgtccaggacattctgaaggcaaatgtgaacctggaa
aaggtgctaatgaaaggctttggggtacatctgaaggacatgtgcaacacctccagcttg
gaggactttgtaaacatcacagacaggaaggtggccaagctgacccaggacatcatctgc
agctcctcacaaaactggctgaaccaggccgaaaaactcttcatgaccaacctagacttc
ttcaagcctataaggtcggacgtaagttcaggaaccagtgatgcccgtcaggtcgccaag
gccacagaaaaccttctggaaagcctgggttctcttgctgtggagctggccagcatgcgg
agctggagtgacctgcgaaatgagatcctcttcctcacccagaatgctaccggttcaccc
agtcagatgtaccaagctgtatcccgaatagtgtgtggacaccccgaaggtggcgggctc
aaaatcaagtcacttaactggtatgaggacagcaactacaaagccctgtttggaaactat
aacagcagtgatgaggagccggtctcagtctatgacaacacaaccactccctactgtaac
aacctaatgaagcacatggagaccagccccatctctcgcatgatctggagggctctgaag
ccactcctaatgggaaagatcttgtacacccctcatacacctgccacacagaagattatc
catgaagtgaacatgacatttcaggagttgggtgtcctcagagatctgggcggaatgtgg
gaggagaccaggcccaaggtctggaacttcatggagaacagcaaggagatgaacctagtg
cggacattactgcagaacaatgccacagccactttcttcagcactcagctgactggaact
cagtggagtgtccaggatgttatcagtttcctgtccaaacagtcggaggacacacgctca
catgggacagcgttcacatggagagacgtcttcaacgagactgaccaggccattatgagc
atatcccgcttcatggagtgtgtaaatctagataaactggagcctgtgagtacggaggag
aagttagtcaacgagtctctgggtctcctggacaacaggaagttttgggctggaattgtg
ttccccgacatcgactcaaacagctcagagctcccaccccatgtaaactacaagatccgc
atggacatcgataatgtggagcgcaccaacaaaatcaaggatgcgtactgggaccctggc
cccagagctgacccatttgaggacctgcgatatgtctggggtggattctcttacctgcaa
gatgttatagagcaaagtattatcagagcagtaacagggaccaaagagaagactggagtc
tacatccagcagatgccttacccatgctatgttgatgatattttcttgcgtgtgatgagt
cgttccatgccactcttcatgaccctcgcctggatgtactctgtggccatcattataaag
agcgtggtgtatgagaaagaggcccgcctcaaggaaaccatgaggattatgggattggac
aacgggatcctgtggttcagctggttcatcagcagcctaattcctctgctcatgagcgct
ggactactagtgcttctgctcaagatggggaacctgctcccttacagtgaccctggtgtg
gtcttcctcttcctgggctcctttgctgtggtcaccatcatgcagtgtttcctcatcagc
acagtatttgctagggccaacctggctgctgcctgtggaggaatcatctacttcaccctc
tacctgccctacgtgctgtgtgtggcctggcaagattacatcggccttcccgccaaagtc
atcgctagcctgctgtctccggtggcatttggttttggctgtgaatactttgctctgttt
gaggagcagggagtgggcatccagtggaacaacctcatctccagcccaatggaggaagat
gactacagcctcaccacctccattatcttaatgtactttgactcatttctctacggtgtc
atgacatggtatatagaggctgtgttccctggtcagtatggcatccccagaccatggtat
ttcccttttaccaagtcttactggtttggagaaggagaccaaaaactgacacccactata
caggggaagaaagcaaatgcaggagctgtgtgcactgaggaagagcctactcacctggac
atgggagtgtacattgagaacttggtgaaggtctatcaccacggcaagaagttggcagtg
gatggcctgacgctgggcttctatgaaggacagattacctccttcctgggtcataacgga
gcaggaaaaaccaccaccatgtctattctgactggtctgtttccaccaacctctggcacg
gcatacatcatgggcaaagacatccgatcagagctgagtgccatccggcaaagtttgggt
gtgtgccctcagcacaacgtccttttcagcatgctgacagtagaggagcatgtttggttc
tatgcgcgcctcaaaggcctgcctgaagatgcagtgagagccgagatagatcagatcctg
tatgacactggactgccacacaaacgcaagtccaggacaagtgagctctctggtggcatg
cagaggaagctttcagtggcccttgcttttgttggagggtcaaaggtcgtcattctggat
gaaccgactgctggtgtggacccttatgcacgtaggggcatctgggacctcctgctgaag
tatcgtgcaggccgcacgatcatcctctccactcatcacatggatgaagcagacatcttg
ggtgaccgtattgccatcatctcccacggaaaactgtgctgtgtgggttcctctctcttc
ctgaagacccatctgggaactggatactacctcactttagtaaagaaagaaccagaagct
tctctcagctcctgcagaaactcaagcagcactgtctcttatgtcaagaaggatgatgaa
gcctcagagagcagctcagatgctggtttaggtagtgatcatgagagtgatgctgtcaca
gctattggctcttcatggactgactcacctattgttcccgcagacatctctctcatctca
ggtctgatcattaagcacgtccccaacgcacgcatggtggaggatttgggacatgagatc
acttatatcatgccctatgaatccgccaaagacggtgccttcgttgaactcttccatgac
ttggatgatcacctcgctgatctgggcatctctagctatggtgtttctgacaccaccctt
gaagagattttcctgaaagtggcagaggacagcggagttgatactgaaatgttgtcagat
ggtacccttcccgtacgtcgacgcaggcgacatgctttcggagctgaccaccagagctgc
cttaaaccgttgactgaggacgacagatttgatggcaatgaatcagaagctgaccccgat
tccagagagactgattatttgagtggttcagatggtaagggctcgtaccaaatccagggc
tggagcctgaagagacagcagtttgtggctttgctatggaagagatttctgtatgctcgt
cgttccaggaaaggcttctttgcacagattgttctgcctgctgtgtttgtgtgcattgct
ttggtcttcagtcttattgttcccccatttggaaaataccccagtcttgccctgcaccct
tggatgtatgaggatcaagtcattttcatcagtgacgatgctcctgaggatgccagcaca
caaaaattacttggtgctctaatggaaggccctggctttggaacacgctgcatggaagga
gaaccagtaccagatgctacttgcactatgggtgatgaggactggtctgtaccggaggtt
ccagagagtgtgctagaggtgttcaggatgcaaaactggaccatggagaatccctcccca
gcttgtgagtgcagctgtgatggcaagaagaagatgctgccagaatgccctgtcagcgct
ggaggactgccacctccacagatgaagatcagtgagagggataccctccaaaacctaact
ggaagaaacatctcagattaccttgtgaagacttatgctcagatcattggcaaaagtttg
aagaacaaagtctgggtgaatgagttcagatatggaggtttctcattgggtgctagaagc
actcagttacttccacctgctgaggagatagatgatgccatttctcgagtgagggaaata
tttaacttggaaaaaaactcagggacagcagctgaccgcttcttaaagagtctctctgcc
ttcattaatggcctggacaccaaaaataatgtgaagatctggttcaataacaagggttgg
catagtattggagctttcctcaacgtgatgaacaacggtattctacgtgccaatctgccc
ccagagaaggacccgagtaaatatggcataacagccttcaaccaccctctaaacctgacc
aaagagcagctctcccaagtggcactggtgacaacctcagtggatgtgctggtgtccatc
tgtgtgatcttcgccatgtccttcgtccctgccagctttgtagtcttcctcatccaagaa
cgtgtgaacaaagccaaacatatgcagttcatcagtggtgtacagccatacctgtactgg
ctggccaacttcatctgggatatgtgcaactatgttgtaccagcaaccctggtcatcatc
atctttgtgtgcttccaacaaaaagcctatgtctcctctaccaacctgcctgtgctggcc
ctgttgttgcttctgtatgggtggtccatcacacctctgatgtatccagcctccttctta
tttaaaatacccagtacggcttatgtcgtcctcactagcgtcaacatccttattggcatc
aacggcagtgtgtcaacttttgtattggagttgtttggcaacaatgaggttggtggcatc
aatgacattctgaagaacgtacttttgatcttccctcacttctgtctggggcgaggtctg
atcgatatggtgaaaaaccaggccatggctgatgctctggagcgctttggtgagaaccgt
ttccgttctcctctggcgtgggacatggtgggtaagaatctctttgccatggcagtggag
ggagtgatcttcttcatcatcactgtcctcatccagtaccgcttcttcttcaaacctacg
tctctgagtgctaaagctgagtccaattggagaggaggatga
DBGET
integrated database retrieval system
