Colossoma macropomum (tambaqui): 118811587
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Entry
118811587 CDS
T09004
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
118811587 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118811587 (rag1)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118811587 (rag1)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118811587 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
118811587
NCBI-ProteinID:
XP_036431794
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
METEPSLPADTPRASMPDELCHPYSKFSDWKFKLFRVRSMEKAPLPSEPPLEKEAQLRVD
VQGDAGGLPGSVMKLCLGGKSKENVEGAGRRVDLKLQEIDTHMNHLRSLCRLCGMILRKA
KGPEHEVQGNLDESSKCALRRMGCKASSWSEVILKVFKVDVSGDMETIHPSMFCHRCWTV
AMRGGGFCSFTRTRVPVWKPHTSHCLLCFPKRLILQRRGRKRSKPLRSAHCLPKRTKRDS
STPTGGNRVWRQTTDNSEAFGLRSWVKPAAQKTLWVKNITRCQKDHLSYQLLPGDLPKDF
VNGVTCQVCEHLLSDPVQSPCLHLFCRTCIQKYSQSLGPQCPSCGILFNPCDLTSPAKAF
LSVLNSLPLVCPREGCGEWVRLDSFGDHCLNHCLETNDDEGQDNPEQNLDGYLPVNKGGR
PRQHLLSLTRRAQKHRLRELKSQVKVFADKEEGGDVKAVCLTLFLLALRAGNEHRQADEL
EAMMQGRGLGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRTAEKELL
PGFHQFEWQPALKNVSTSWDVGIIDGLSGWTVSVDDIPADTIARRFRYDVALVSAVKDLE
EDIMEGLRERGLDDSTCTSGFSVVIKESCDGMGDVSEKHGGGPAVPEKAVRFSFTVMSIT
VQVEGEEEAVTIFQEQKPNSELSCRPLCLMFVDESDHEMLTAILGPVVAERKAMKESRLI
LSIGGLLRSFRFYFRGTGYDEKMVREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITR
SHEENLERYEIWRTNPFSESADELRDRVKGVSAKPFMETQATLDALHCDIGNATEFYKIF
QDEIGEMYLKNNPTREERRRWRSALDKQLRKKMKLKPVMRMNGNYARRLMTREAMEVVCE
LVPSEERRKALRELMELYLQMKPVWRSTCPARDCPDQLCRYSFNSQRFAELLSTTFKYRY
DGKITNYLHKTLAHVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFELEDIL
KHHWLYTSKYLQKFMEAHKNSAKALQATINPEECPDDLDMADIPDF
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggagacagagccaagccttccggcggatacgccgagagcctccatgccggacgagctg
tgccatccttattccaaattctccgactggaagttcaagctcttccgggtgcggtccatg
gagaaggcgcccttgcccagtgaacctcccttggagaaggaagcgcagctgagggtggat
gtgcagggggatgccgggggccttcctgggagtgttatgaagctctgtttggggggcaag
agcaaggagaatgtggagggggctggcaggcgtgtggatctcaagcttcaggagattgac
acacacatgaaccatctcaggtctttatgtcgcttatgtggcatgattctcaggaaagcc
aaaggcccagagcatgaagtccagggaaacttggatgagtccagcaagtgtgccctgcgt
aggatgggttgcaaggcttctagctggtctgaagtcattctgaaggtgtttaaagtggat
gtgagtggagacatggaaaccatccacccctcaatgttctgtcaccgatgctggacagta
gccatgagaggaggggggttctgtagctttactagaacacgggtccctgtgtggaagcct
catacctcacattgcctgctctgcttccccaagagactcatacttcagaggaggggaagg
aagagaagcaaaccactacgtagtgcacattgcctgcccaagaggaccaagagagactct
tcaacacccacggggggcaacagagtgtggagacagaccacagacaactcagaagcattt
ggcttgaggtcatgggtaaaaccagctgctcagaaaaccctttgggtaaagaatataact
cgctgtcagaaagaccacctaagctatcagctactccctggcgatctcccaaaagacttt
gtgaatggtgttacctgccaggtgtgtgagcacctgctctctgacccggtccagtccccg
tgccttcacctcttctgtcgcacctgcatccagaaatacagccaatctttgggtccccag
tgtccatcctgtggcatcctttttaacccatgtgacttgactagccctgccaaagccttt
ctctccgttctcaactctcttcctctggtctgtccaagagaaggctgtggggagtgggtc
agattagactccttcggagaccattgtctgaatcactgccttgaaacaaatgacgacgag
ggacaggataatccagagcagaatctggatggctacctgcctgtcaacaagggtggccgt
cctcgacagcacctgctctcgctaacacgaagagcgcagaagcacaggttgagagagctg
aagagtcaggtgaaggtattcgctgacaaggaggagggtggagatgtgaaggccgtgtgc
ttgacactgttcctgctggcattaagggctgggaatgaacacaggcaggctgatgagctg
gaggccatgatgcaaggcagggggcttggcctgcaccctgcagtgtgtctggccatacgg
gtcaacaccttcctcagctgtagccagtaccacaagatgtaccgcaccgtcaaggccact
agcggacgccagatcttccagcccttgcacaccctccgtactgctgagaaggaacttctc
cctggcttccatcaatttgagtggcagcctgctctcaaaaatgtgtctacctcttgggat
gtaggcatcattgatggactctctggctggacagtctctgtagatgatataccagcagat
accattgctagaagattccgctatgatgtggcactagtatcagctgtcaaagacttggaa
gaggacatcatggagggactaagggaaagagggttggatgacagcacttgcacttcaggt
ttcagtgtggtgatcaaagagtcatgtgacggcatgggagatgtcagtgagaagcatgga
ggagggccagctgttccggagaaggcggtgaggttctcttttacagtgatgtccatcacg
gttcaagtggaaggtgaggaagaagcagtcacaatcttccaggagcaaaaacccaactca
gagctctcctgcaggcccctgtgcctgatgtttgtggatgagtctgatcacgagatgctg
actgccatcttgggtcctgtagtggcagaacgtaaagctatgaaggagagtcgcctcatt
ttgtccataggtgggcttcttcgttcctttcgcttttacttccgaggcacaggctacgat
gagaagatggtgagagaaatggaagggttggaggcttcaggctccacttacatctgcact
ctgtgtgactccacacgagctgaagcctctcagaacatggtgctgcactctatcacccga
agccatgaggaaaaccttgagcgctatgagatttggagaaccaaccctttctccgagtct
gcagacgagctgcgggatcgagtcaaaggggtctcagctaagccttttatggagacccag
gccacgctggatgccttgcactgtgacattggcaatgctacagagttctacaagatattc
caggatgagatcggcgaaatgtacctaaaaaacaatccaactcgagaggagcgtcgacgc
tggcgatcagcccttgacaagcagctgaggaagaagatgaagctgaagccagtgatgagg
atgaatggaaactacgcccggcggctgatgacccgtgaggccatggaggtggtgtgtgag
ctggttccttcagaggagcgtcgcaaggccctgagagaactgatggagctgtatctccag
atgaagcccgtgtggcgctccacctgcccagccagagactgccctgatcaactctgccgt
tacagcttcaactcccaacgctttgctgaactcctgtccaccacattcaaataccgttac
gatggcaagattaccaactacctccacaagactttggcccacgtgcctgagattgtggaa
cgagatggctcaattggtgcttgggccagcgaggggaatgagtctgggaacaagcttttc
cgccgcttccgtaaaatgaacgccaggcagtccaagacatttgagttagaagacatacta
aaacaccactggctatacacatccaagtacctgcagaagttcatggaggctcacaagaat
tctgccaaagcactgcaagccaccatcaacccagaggaatgcccagatgacttggatatg
gcagacataccagacttttga
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