Colossoma macropomum (tambaqui): 118811742
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Entry
118811742 CDS
T09004
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118811742 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118811742 (cnot2)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118811742 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118811742 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
118811742
NCBI-ProteinID:
XP_036432068
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MFSATRKKFEGVESDYPDESMYYGQPSMFPHRSEKDMLASPSPSSSGQLSQLGASLYGPQ
SALGFSIRGMNNNNPQLNRSLTQGTQLPSHSTPTTGVPTMSLHTPPSPNRGILPMNSRNM
MNHSQVGQGMSMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGMGRS
QGFGMNSLSNNIFNGTDGSENVTGLDLSDFPALADRSRREGNGNPTPLHNPLAGRAPYVG
MVTKPSTEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSQNLNSSAKSSSSADGPKFPG
DKTSAQNNNQQKKGIQVLPDGKVTNIPSGMVTDQFGMIGLLAFIRAAETDPGMVHLALGS
DLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLARYG
EDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYY
FFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgctacgagaaagaagtttgagggggtcgaaagcgactaccctgatgagagc
atgtattatggccagccgtcgatgttccctcatcgatcagagaaggatatgctggcatct
ccctcaccatcatcgtcaggtcaattgtcgcaacttggtgcaagtttgtatgggccacaa
agtgcactaggcttctcaataaggggcatgaacaacaacaaccctcagttaaaccgaagt
ttaacacaaggtactcagttaccgagccatagcaccccaacgacaggcgtcccaacaatg
tccctccataccccaccttcgccgaacaggggaattctacccatgaactccagaaacatg
atgaatcactcgcaggtgggccagggcatgagtatgagtggcaggaccaacagtatgggc
agttcgggccttggcagccccaaccgcagctctcctagcatcatctgcatgccaaagcaa
cagccagcacgccagcctttcaccatcaacagtatgtcaggttttggaatggggcgaagt
caagggtttggtatgaactctttatcgaacaacatcttcaatggcacagatgggagtgaa
aacgtgacaggactggacctctctgactttccggcgttagcagacagaagtcggagggaa
ggaaatggcaacccaacaccgttgcataatcccctggctggaagggctccctacgttggg
atggtcacaaaaccatcgactgaacagtcacaagatttctcgattcacaacgaggacttc
cctgcactgcctgggccgaactacaaggacccaacgttgagcacggacgaaagcaaatca
cagaacttgaactcatcagccaagagcagctccagtgcagatggccctaagttcccaggt
gataaaacatcagcacagaacaacaaccagcagaagaaagggatccaggtcttgcctgat
ggcaaagtgacgaacattccttcaggaatggtgacggaccagtttggaatgattggactt
ctggcgttcatccgggcggccgagacagatcctggcatggttcacctggcgttaggaagc
gacctgactacactgggactcaacctcaattctcctgagaatctgtatcctaagtttgca
tctccttgggcctctgcaccatgccgaccacaggatattgacttccatgttccctctgag
tacttaaccaacattcatataagggacaagctggctgcaataaaactggcacgttatgga
gaggacctgctgttctacctctactacatgaatggaggagacctcttacagcttctagct
gctgtggaactcttcaaccgagactggaggtaccataaggaggagagggtgtggattaca
agagcaccaggcatggaacccaccctcaagacgaacacctacgagagagggacatactac
ttctttgattgtcttaactggagaaaagtagctaaggagtttcacctcgaatatgacaag
cttgaggagcggcctcacgtgccaaccaccttcaactacaacccggcccagcaggccttc
tga
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