Colossoma macropomum (tambaqui): 118811828 Help Entry 118811828         CDS       T09004                                  Symbol spg11 Name (RefSeq) LOW QUALITY PROTEIN: spatacsin   KO K19026   spatacsin Organism cmao  Colossoma macropomum (tambaqui) Brite KEGG Orthology (KO) [BR:cmao00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cmao03400]     118811828 (spg11) DNA repair and recombination proteins [BR:cmao03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      118811828 (spg11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  118811828 NCBI-ProteinID:  XP_036432249 LinkDB All DBs Position Unknown AA seq 2387 aa AA seqDB search MLSRPEARVQKSLEVALLPENDVCKDVENIVKAKMAKGCSLLCCLNVGGQLLVSDVSERG SLVHTLEDSYTDFFWEVLTERSNTDTNPRLLTVGPEGELRLHEVGQESQLSHLSEYPTHR LLQLVKEKDPSASKLTCAKLLLFTDGRCFLLLNTCVLVQLQYLEGSAEPETVSSCLINLP PEIRETCTDYQLCRGTLFVLTSAGLIYVFDSVEGKHLATVDLPVYYTSGQREVELVISLS SFCLLNISQDLSTAVAATSKNQALALDLNDYFRTHPDQLLCQQSPSLLPLMPTKPCDQDS ITSSAYSQSVLGTHFQTDHSWEAKLVLLYKRAKAPEPPALRLPWYRDIPNSECRQMAATA KLSQPSVPAGGILTSFVVPEQTTPAMLNVSEFSAVLTFTSAGNSCTTLAHWDLESQNVTY HCVDAPAAPVQRSEEEHLSLILKASGLSLVLFAVSQEELLNRLMVFGSAGVADSLCHLNA WGRCSMPIHALQAGLKNRQLDMVDFFLKSKENILCPPTGYSMHEQAAASSTQMQLKNAQD LCPALDLLHSAIKDTYAEAQSPQFCEQLLNITLNFLNTQIRVILSSTPELDVNLQECVKI LNGYISELRTYMRKYPWLVGGDQIPAPKPSPDMTLEDEWESMSVEEVVKCAVLCSEIPRA QAYLRRRSCPEQKLEELRTTGLNLTFSCLTQRDLQQATALLTNMGFNVKEQLHKICMYTA DRDLRAFMVEELKRQNHLSTEEMEKVEFIKQIEQFCLTPATRCLNPLDKNRVLQISQSEA ESRCLLQEMHGPLHSSFQSLLGSVRLDWVRHWDNDTQRTVLLSRLPRPLLGSCDSAVLWS YLTSLHDQTRVTAWLTSMATQDRENTAAPQWPALTAAIVNGNTLCSDYMRDQILDMLARQ EVFVQSEMSDFEQLLWRVSQAGGVMRANSVPPVPQFHVSQGQDFHTRFIQHCLENSLHYL LYTYLEHYRLTPSNCPAIGDRGLYESYPWFEMMVKLQRITRDLTDPERVFQASLTSAQVL LPGSQASVSSMLLEGHSLLALSTIMFGPGGIDQVVREGDKSQDILCRVDPQLLRMALSAY PKLKAALFPHSGPRGTSACDISIYQLMQSLHPLDPSKLFGWQSANTLGTAETSTEFPHFS SPHLVNKYALIENLDFLYYLQHGRPSFAYGIFIIHHLANSKNVKLQISLAVEQVYALGLL NFNSPSVATACVCFCELLGVCSQKLRVDIKALNLILKLWSQNCEENSLVSLKQSLVEKVN KLVAAEKQTAEELLLHLEGAIRDSVERRCISRSSYEAGQEWALPVQFCHLHGLPLSAGYL RDCASDGQWLNFLLFVQIHHYPPQQVRSLVTSFSPALQAHLFLAFQDLQLVHSQQGLEGQ RDSLCPLSTEESSESPKDLFQVLLQSQEKTSPWRHLLAEAVEQHCPPLTVLAACHQDAEL LQCLCVWILTSVDDDIAQEATVHINENPAHHTWNLHDLSVLWKTLLRKCKIRPLIRGFQL FQRESPLIHMLQMFELCYDYKNYEGAKDKLLEFQKCLLNLRSSGSVMGLECLPVQWVESQ ASVLLLILMQQCGTQYELRRLLQLLADMERLLKSNGPDFKKLSQLSQILAETPVCLSPCL LEDYTPENLQRECQSMLEELQELGLFSQARRVAELAGLPIDRLIVNELLRDLEVQKGKRQ WERQDTRLAFWRRCHEQFRTDCIGAEAACQFFLSQAEEPLQKDTELLHVQERCLLLGLAG HWLSQCSSHAAVERMAHLEKQQWQCRVRRLVLTTAMEQESLFAPAAGVEDSFNSLLKEYS FSKMAVLNNPAHLSLDTLPSSEERCLLVGEECKALTTLIGQLLDEGNIHEASRVCRYFGL YHKDLRLVLQCEGLACGELQPGLQELPSPDAESRSSLPSCSSTGSLSSFVVVSSPEDQVL SQLQLLVEQCRHGKSYCKQVLSLYELSKELRCSYVEISSEEPEAVLRKVLLSHQPERYKK AQAFISVQGFKPDTVAQLISSTVLDGLLASSQEGETAERCIYSPSEGREAFLQLAKLCGD PNLVGNKLLDSIPTVPLAELGCTVELLILAHDCFSLTCNMEGIVKVLQAARHLSHTHLAH GEGYGLLVRLLTGIGRYNEMTYVFDLLNQNHRFEMLLRKKVESNTRLKTALLDYLKRCLP GDSEKHNMVALCFSMRREIGENHEGAARTQLKLIESQPWAVTPELKSGLEKVLFLLKDAA ESYSKDSCMRQALRCVKLAKLITLQLHFLNHGQDHRVVNLRPAELLSAVVALPRCYQSFV VAEAYDYSPDWAEVLYQKVILRGEFSYLEEFKLHRQLSASLFEEISKKLLLNKPPNSASQ NLKKLLQHCEDIYTRYKLAYEHNFIDVANMLLQDSKTNSYLNDRLST NT seq 7164 nt NT seq  +upstreamnt  +downstreamnt atgttaagcaggcctgaagctcgagttcagaagtctttagaagttgcacttctacctgaa aatgacgtgtgtaaagatgttgagaacatcgttaaagccaaaatggctaaaggctgctct ctgctctgctgcctgaatgttggtggccagttgttagtcagtgatgtttctgagcgcggc agtctggtacatacactagaggactcatacacagactttttctgggaggtgttgacagag cgaagtaacactgataccaaccccagactcctgactgtgggaccagagggtgaactcaga ctgcatgaggtcggtcaggaaagccagctgtctcatctgtctgaatacccaacacacaga ctgctgcagcttgtcaaggagaaggacccgagtgcgagtaaactgacctgtgcaaagctg ctgttgtttaccgatggccgctgtttccttctgctgaacacgtgtgtgctggtacagctc cagtacttggagggctctgcagagccagagactgtgtcttcctgtctaatcaacctgcca cctgaaattcgggaaacatgcactgattaccagctctgcagaggcactttgtttgtgctg accagcgctggacttatatatgtgtttgatagtgttgagggaaagcacctggccacagtt gatcttcctgtatactatacatcaggacagagagaggtggagttagtgatatccctctcc tccttctgccttctaaacatatcgcaggacctcagcacggctgtggctgctaccagcaaa aaccaagcgctggcactcgacctcaatgactacttcaggactcatccagatcagctgctg tgccagcagtctcccagtctccttcctctcatgcccacaaagccctgtgaccaggacagc atcaccagctcagcatacagtcagtctgtactgggcactcacttccaaactgaccactca tgggaggcaaagttggtgctgctgtataagcgagctaaagctccagaacctccagcgctc cgactgccctggtacagagacatccccaactcagagtgccgtcaaatggctgccaccgcc aagctcagtcaaccctccgtaccagcagggggtatcctgacgtccttcgttgtacctgaa cagaccacaccagccatgctgaatgtctcagaattctcagcagtgcttaccttcacctca gctggaaacagctgcaccactctggctcactgggatctggagagtcaaaatgtgacgtat cactgcgtagatgcccctgctgcacctgttcagcggtcagaggaggaacacctctctctg atactaaaagcatcaggcttgtctctggtgctcttcgcggtttctcaggaggagctgttg aacagattgatggtgtttggcagtgctggcgtggcagactctctctgccatctgaatgct tgggggcgctgctctatgcccatccatgccctgcaggcaggactgaagaatcggcagctg gacatggtggatttctttttgaagagcaaagaaaatattctctgtccaccaacaggctac agtatgcatgaacaggcagctgccagctcaacacagatgcaactaaagaatgcccaggat ctgtgtccagcgctggatcttcttcactctgctatcaaagacacatacgccgaggctcag agtccacaattctgtgaacagctgcttaacatcaccctcaatttcctcaatacacagatc agagtcattctcagcagcacgccagagctggatgtcaatctgcaggagtgtgtaaagatc ttgaatggttatatctctgaactgcgcacctacatgaggaagtacccctggctggtaggg ggtgatcagattcctgcccctaaaccttcacccgatatgaccttggaggatgagtgggaa tcaatgtctgtagaggaggtggtgaagtgtgcagttttgtgcagtgagatcccgcgtgca caggcgtatctgcgcagacgtagttgtccagaacagaagctggaggagctgagaacaact ggcctgaacctgaccttctcctgcctcacacaaagagacctgcagcaggccactgcactg ctcactaatatgggtttcaatgtgaaagaacagcttcacaaaatctgcatgtacacagct gatcgggacctcagagcatttatggtagaagagttgaaaaggcagaatcacctctccact gaggagatggagaaagtagagttcattaaacagattgagcaattttgcttaacaccagca acacggtgtttaaatcctttggacaagaacagagttcttcaaataagccaatcggaagct gagagcagatgcctgctacaggagatgcatggaccactgcattcctccttccagtctctg ctgggctcagtgcgtttggactgggtcagacactgggacaatgacacacagagaactgtg ctcctctccagacttcccaggcccttgctgggctcctgtgactctgctgtgctgtggtca tacctcacctcccttcatgaccagacgcgtgtcactgcatggctcacaagcatggctact caggacagagagaacactgctgccccccagtggcctgcacttaccgctgccattgtgaat ggaaacaccctctgtagtgactacatgagagaccaaatcctggacatgcttgccaggcag gaggtctttgtgcagtcagagatgtctgattttgagcagttgctgtggagggtgagtcag gctggaggagtgatgcgggctaacagtgtccctcctgtcccgcagttccatgtttcccaa ggccaggacttccatacacgctttatccagcactgtcttgagaatagcctacattacctg ctctatacctacctggagcattacaggttgacacccagtaattgccctgctattggagac agaggtttgtatgagagttatccctggtttgagatgatggttaaactacagagaattaca agagatctcacagacccagagcgagtgttccaggctagcctgacaagtgcacaggtgctg ttgccgggcagccaggctagtgttagcagtatgctgctagagggacatagcctccttgct ctctccacaataatgtttggacctgggggcatcgatcaggtggtgagagagggagataaa agtcaagacatcctgtgcagagtggacccccagctgctgaggatggctctgagcgcatac cccaaactcaaagctgctcttttcccccacagtggcccacgaggcacctcagcttgtgat atttccatctaccaactcatgcagtctttgcacccattggatccctccaaactgtttggg tggcagtctgccaacaccttaggcaccgctgaaacgtcaactgagtttccccatttctcc agccctcacctggtcaataagtatgctctcatcgagaacctggacttcttatactacctg caacatggcaggccttcttttgcctacggaattttcattattcaccatctggccaattcc aagaatgtgaagctgcagatcagtctggccgtggaacaggtgtacgcgctgggccttctg aatttcaactctccatctgtggctacagcatgtgtgtgtttctgtgagttgttgggtgtc tgcagtcagaagctgagggtggacatcaaagccctcaatctcattctcaagctgtggagt cagaactgtgaggagaacagcttagtctccctcaaacagtctctggtggagaaggtgaat aagctggtagcagctgagaagcagactgcagaagaactgctgctgcatctggaaggagca ataagggacagtgtagagaggagatgcatcagcaggtcgtcgtatgaggcggggcaggag tgggctctccctgtccagttctgccatttgcatggtcttcctctgagtgctggctactta cgagactgtgccagcgatggccaatggcttaacttcctgctgtttgtacagatccaccac taccctcctcaacaggtcagatcactggtgactagcttcagtccagctctgcaggcccac ctcttcctggcctttcaggaccttcagcttgtccattctcagcagggcctggagggccag cgtgactccctctgccctctgtcgacggaggaaagctctgagtcaccaaaagatctgttc caggtgctgttacagagccaggagaagaccagcccctggaggcacctgctggctgaggct gtagagcagcactgtccaccacttacagtgctggcagcatgccaccaggatgctgagctc ttgcagtgcttatgtgtgtggattttgacctctgtcgatgatgacattgcccaggaggcc accgtccacatcaatgagaatccagcccaccacacatggaatctccatgacctgtcagtc ttatggaaaactctccttcgcaagtgcaagatcaggcctctgattcgtggcttccagctg ttccagcgggagtctccactgatccacatgctgcagatgttcgagctctgctacgactac aaaaactacgagggggccaaagacaagctactggaattccagaaatgtctgctcaatttg aggagcagtggtagtgtgatgggtttggagtgtctcccggtgcagtgggtggagtctcag gcctcagtgctgctcctcattctcatgcaacagtgtggaacgcagtacgagctgcgcaga ctgctgcagctactggctgacatggagcgtctgctcaagtctaatggtcctgactttaag aagctgagtcagttaagccagatcctggcggagacccccgtgtgcctgtccccatgcctg ctggaggactatacccctgagaacctgcagagggagtgccagagcatgctcgaggagctt caggagctgggcctcttctcccaggccaggagagtggctgaactggcagggctgcccatc gaccgcctcatcgtaaatgagctgttgcgggacctggaggtgcagaagggcaagcggcag tgggagaggcaggacacccgactggccttctggaggagatgtcatgagcagttcaggact gactgcattggagcggaggcagcatgccagttttttctgtctcaggctgaggagcctctg caaaaagatacagaacttcttcatgtacaggagcgctgcctcctgctgggtctggctggt cactggctgtcccagtgcagttcccatgctgctgtggagcgcatggctcatctggagaag caacagtggcagtgtcgtgtccgccggctggtcctgaccactgctatggagcaggagagc ctgtttgcaccggctgctggggtggaggactccttcaacagcctcctgaaggaatactcc ttctctaaaatggctgttctgaacaatccagcacatttgagcctggatacacttccatca tcagaggagagatgcttgctggtgggagaggagtgcaaggctctgaccactttgatcggc cagctgttggacgaggggaacattcatgaagcaagtcgtgtgtgtagatattttggactg tatcacaaggatttgcggctggtgttgcagtgtgagggcttggcctgtggagagctacag ccgggcctgcaggaactccccagccctgatgcagagagcaggagcagcctccccagctgc tctagcactgggagtctgtcttcctttgtggtggtttcctcccctgaagaccaggttctt tcccaactccagctgctagtagagcagtgtcgtcatgggaaaagctactgcaaacaggtc ctcagcctctacgaactctccaaggagctgcgttgctcttatgttgagatttcctctgaa gaaccagaggcagtgctacggaaagtgctgctatcccaccagcccgagcgctataagaaa gcccaggcatttatcagcgtccaggggtttaagccagacactgtagcccagctcatttcc tccactgtgcttgacggactactggcctcctctcaggaaggagagacagcagagcggtgc atatatagcccatctgaaggtagagaagccttcctgcagctggctaagctatgtggagat cccaacttggtgggcaacaagttgttggacagcatccccacagtccctctggctgagctg ggctgcactgttgagttgctgatactggcccatgactgcttcagtctgacttgtaacatg gagggcatcgtcaaggtcctgcaagcagccaggcatctcagccacacacacctggcccat ggggagggatacggactgctggtgcgacttctaactggaattggaagatacaatgaaatg acatacgtttttgacctgctcaaccagaatcaccgatttgagatgctgctgaggaaaaaa gtggagtcgaacaccaggttaaagacggctctgctggactaccttaagcgctgtctgcca ggggacagtgaaaaacacaacatggtagctctgtgtttcagcatgcgcagagagattgga gagaaccatgaaggagctgctcgaacacagctcaaactcattgagtcacagccatgggcc gtcaccccagaactcaaaagtggcctggagaaagtcctctttttgctcaaagatgctgct gaaagttactctaaggactcatgcatgcggcaagcactgcggtgtgtgaaattggctaag ctcatcaccctgcagcttcacttcctcaatcatggacaggaccaccgtgttgtcaacctg cgaccagcagaactgctcagtgccgttgtagctctgccacgctgttaccagtcgtttgta gtagcagaggcgtacgattatagccctgactgggcagaggtcctgtatcagaaggtgatt ctgagaggagaattctcttacctggaagagtttaagcttcacagacaactttcagctagt ctgtttgaggaaatctccaaaaaacttttactcaacaagcccccaaacagtgccagtcag aacctgaagaaactccttcagcattgtgaagatatctacacccgctacaaactggcctac gagcacaattttattgatgtggccaacatgctccttcaggactccaaaacaaacagttac cttaatgaccgattaagcacctag

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